PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG004490.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 496aa MW: 56456.8 Da PI: 8.4702

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004490.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.3	3.5e-20	66	152	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + tf Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7BG004490.6 66 EYYNTYAKAKGFGVTRRSSNRD-DNGQLKYLTFSCSRYGKAQSNSGN---MLKPSRTVGTGCKAKINITRAPDGRFHLSTVILDHNHALSP 152 69*************99998.8889************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
FIGMDDGIGG VQESSDMSIS SDDDGIKQQR ESNVELAHDR AEAHPDGLLR EPEVGMSFGT 60 ETEVREYYNT YAKAKGFGVT RRSSNRDDNG QLKYLTFSCS RYGKAQSNSG NMLKPSRTVG 120 TGCKAKINIT RAPDGRFHLS TVILDHNHAL SPLKPRRFRC NKKLDFRVKR RLELNDPAEI 180 RVNKSSTIPR VTHFDIEKQF QSAYTNSKFK EFQEELTQTM YCDRKLMQKE GAIETYEITE 240 DVLIDEDKGW RKDIVHHVYF SEEEFEVKCS CRRFEFTGIL CRHVLCVLTH KKIKEVPPQY 300 VLDRSKKNVN RKHNFIRCTY GGMEDTPAAE RFDRLCNSFY PVAEIGSMSD DSCNALIEEL 360 RTLKIRFSSN SSSENGKEHV ATREDAHSNG KTTSKNIPSP IAVRCAGCPP SLRKESMLDK 420 LICQASEKKK EAEQKASSTN LNKKRPRKNR KSSVDDILEQ HVMEHSSQQP VCLDGPASSI 480 TSQLYLFLIF LFVANT

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

FIGMDDGIGG VQESSDMSIS SDDDGIKQQR ESNVELAHDR AEAHPDGLLR EPEVGMSFGT  60
ETEVREYYNT YAKAKGFGVT RRSSNRDDNG QLKYLTFSCS RYGKAQSNSG NMLKPSRTVG  120
TGCKAKINIT RAPDGRFHLS TVILDHNHAL SPLKPRRFRC NKKLDFRVKR RLELNDPAEI  180
RVNKSSTIPR VTHFDIEKQF QSAYTNSKFK EFQEELTQTM YCDRKLMQKE GAIETYEITE  240
DVLIDEDKGW RKDIVHHVYF SEEEFEVKCS CRRFEFTGIL CRHVLCVLTH KKIKEVPPQY  300
VLDRSKKNVN RKHNFIRCTY GGMEDTPAAE RFDRLCNSFY PVAEIGSMSD DSCNALIEEL  360
RTLKIRFSSN SSSENGKEHV ATREDAHSNG KTTSKNIPSP IAVRCAGCPP SLRKESMLDK  420
LICQASEKKK EAEQKASSTN LNKKRPRKNR KSSVDDILEQ HVMEHSSQQP VCLDGPASSI  480
TSQLYLFLIF LFVANT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	172	RRFRCNKKLDFRVKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	9e-18	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004490.6