PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG004100.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 27659.4 Da PI: 9.1757 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.3 | 6.4e-09 | 1 | 36 | 6 | 43 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaei 43 n E+rRR+riN+++ L++l+P+ + + + +K ++ TRIDC7BG004100.3 1 NLSEKRRRSRINEKMKALQSLIPNsN---KVGSATKLTT 36 678*********************66...5555555554 PP | |||||||
2 | HLH | 14.2 | 8.3e-05 | 62 | 78 | 39 | 55 |
TCHHHHHHHHHHHHHHH CS HLH 39 sKaeiLekAveYIksLq 55 +Ka++L +A+eY+k+Lq TRIDC7BG004100.3 62 DKASMLDEAIEYLKQLQ 78 8***************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
NLSEKRRRSR INEKMKALQS LIPNSNKVGS ATKLTTVPLH FSFSSLNSGL LSFVVLLWLQ 60 TDKASMLDEA IEYLKQLQLQ VQMLSMRNGV YLNPSYLSGA LEPMQASQMF AALGVSGRNV 120 AAPSSGAVAP PVNQSSGAHH PFDPMNSQQN QPQPLVLPSC PKTTISEPPF HLESSQSHLQ 180 SFQLPESSEL MLRGDIMLKH HLTSAQDRAD PSGNKMNSLR QESTMLNTHF DGCSRSKEQS 240 HDMVPANTRH V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36930.1 | 4e-28 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG004100.3 |