PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG003150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 217aa MW: 25023.2 Da PI: 7.8732 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.6 | 1.7e-28 | 1 | 49 | 3 | 51 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 i+nks rqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++g+l+e+s+ TRIDC7BG003150.1 1 IDNKSSRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 49 89*********************************************96 PP | |||||||
2 | K-box | 92.7 | 6.2e-31 | 74 | 162 | 12 | 100 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++ + +qe+ kLk ++e Lq++qR+llGedL++L++keL+qLe+q+e slk+iR++K++ l+q+ el++ke++lq+ nk+Lrkk++e TRIDC7BG003150.1 74 ETELNNYQEYLKLKTRVEFLQTTQRNLLGEDLGPLNMKELEQLENQIEISLKHIRATKSQQSLDQLFELKRKEQQLQDVNKDLRKKIQE 162 44557899*******************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
IDNKSSRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFST RGRLFEFSTS SCMYKTLERY 60 RSCNFNSEAT AAPETELNNY QEYLKLKTRV EFLQTTQRNL LGEDLGPLNM KELEQLENQI 120 EISLKHIRAT KSQQSLDQLF ELKRKEQQLQ DVNKDLRKKI QETSAENVLQ LSCQDVGPSG 180 SSGHANQANQ QQHFHPACDP SMRIGYQRNF LDQLNNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.1 | 2e-67 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG003150.1 |