PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG002000.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 348aa MW: 38125.1 Da PI: 6.574

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG002000.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25	3.3e-08	156	198	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + E++RR+r+ ++f L l+P++ +K + a++ A+eYI++L TRIDC7BG002000.1 156 KKEKQRRQRLSEKFTALMLLIPNR-----TKEDRATVIYDAIEYIQEL 198 57*******************9.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MYHQQCELLM PHEGLDMDAG QSHHLAAASA VPAELNFHLL SYVDTAVSPQ QPTVEYFFGG 60 TDQPHAQFEQ LAANHQAMTA LRDYYGQYPA TADAYLPGAQ RTGSSSLVFG AAEEESAYMV 120 GGFQCSPKPR TGGGRKRGRG VGSSFHGFPA NGGVEKKEKQ RRQRLSEKFT ALMLLIPNRT 180 KEDRATVIYD AIEYIQELGR TVEELTLLVE KKRGRREHQG DVVDPAPTVV AGEGECSAGE 240 VAAAVMPAMP APPQPIRSTY IQRRSKETFV DVRIVEDEVN IKLTKRRRDG CLAAASRALD 300 DLHLDLVHLS GGKIGDCHIY MFNTKIHPGS PVFASAVASK LIEVVDEY

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MYHQQCELLM PHEGLDMDAG QSHHLAAASA VPAELNFHLL SYVDTAVSPQ QPTVEYFFGG  60
TDQPHAQFEQ LAANHQAMTA LRDYYGQYPA TADAYLPGAQ RTGSSSLVFG AAEEESAYMV  120
GGFQCSPKPR TGGGRKRGRG VGSSFHGFPA NGGVEKKEKQ RRQRLSEKFT ALMLLIPNRT  180
KEDRATVIYD AIEYIQELGR TVEELTLLVE KKRGRREHQG DVVDPAPTVV AGEGECSAGE  240
VAAAVMPAMP APPQPIRSTY IQRRSKETFV DVRIVEDEVN IKLTKRRRDG CLAAASRALD  300
DLHLDLVHLS GGKIGDCHIY MFNTKIHPGS PVFASAVASK LIEVVDEY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	140	GRKRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06170.2	3e-36	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG002000.1