PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG078450.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 772aa MW: 86044.2 Da PI: 6.9622

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG078450.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.2	4.3e-21	80	167	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y+ YA ++GF+vr++++++sk++ge+t+ +f Cs+eg+++++ ++ + + + rtgC+a+l+++++k g+++v+ ++ HnH+l+ TRIDC7AG078450.6 80 LYRLYAFKLGFNVRRRYTNRSKTSGEVTSCKFACSREGFKDHKLSR--AAAIPAPDGRTGCNAHLTLRRTKpGGHFQVSAFQPRHNHPLF 167 79**************************************9888..9999***************9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
PIATDTPPPP PPEPNASAAF SGSSPAQTTR TAASASARPE DRQSPPSGDA STGAAIAARP 60 EECTPRMDME FDTELQAYDL YRLYAFKLGF NVRRRYTNRS KTSGEVTSCK FACSREGFKD 120 HKLSRAAAIP APDGRTGCNA HLTLRRTKPG GHFQVSAFQP RHNHPLFAAP RGPPSPFHSP 180 PNAAPPPDFI DDDATAGAAC AEGDGPLRTR RQWEIKYGEA AALLNHLQRQ SLADPGFHHA 240 MQLDVEDKVA NVFWVDAKMV ADYAHFGDAV AFDVVSRNSI SLRHLASFVG CNSFGEPVVF 300 GLALMYDESC ESFRWLFQTF LHAMSGRAPK TFISHQDTVI AEALSLAMPG TTTTHAICAW 360 HIKHVAKGNI RQLSKGDASF IEEFKACVDG EYGEEAGFLA AWDAMISKYE LRDNAWLQRL 420 FEEKHKWARP YTKGIFSAGM EGTRLNERLS SEVRSHLRAE VDIALFLRHL QKVISDRRHR 480 ELEMEYGSRL MMPYLKIRAP VLTQASEVYT SVIFQLFQEE YEEFQSAYIV SRDESGPCRE 540 YVVSLVEKED CRYTVYGNPM EQTVACSCGK FEMVGFLCSH ALKILDVMDI KYIPDRYIMK 600 RWTKYARRLT SSSLEVPVPG QAVQEEESLE ISSNRYQHLC PKYVRLVARA SECEESSRVL 660 DQFWGELGDK VEQILQKQTS VSSAPVTLQP DVQNLKMALS SITDGTESEN VLDISSRAVA 720 ETVKKKGQKS KNHPRNCVEK GLTKKQKVHS EEPALVHYGL ADGSAQSGNA MF

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

PIATDTPPPP PPEPNASAAF SGSSPAQTTR TAASASARPE DRQSPPSGDA STGAAIAARP  60
EECTPRMDME FDTELQAYDL YRLYAFKLGF NVRRRYTNRS KTSGEVTSCK FACSREGFKD  120
HKLSRAAAIP APDGRTGCNA HLTLRRTKPG GHFQVSAFQP RHNHPLFAAP RGPPSPFHSP  180
PNAAPPPDFI DDDATAGAAC AEGDGPLRTR RQWEIKYGEA AALLNHLQRQ SLADPGFHHA  240
MQLDVEDKVA NVFWVDAKMV ADYAHFGDAV AFDVVSRNSI SLRHLASFVG CNSFGEPVVF  300
GLALMYDESC ESFRWLFQTF LHAMSGRAPK TFISHQDTVI AEALSLAMPG TTTTHAICAW  360
HIKHVAKGNI RQLSKGDASF IEEFKACVDG EYGEEAGFLA AWDAMISKYE LRDNAWLQRL  420
FEEKHKWARP YTKGIFSAGM EGTRLNERLS SEVRSHLRAE VDIALFLRHL QKVISDRRHR  480
ELEMEYGSRL MMPYLKIRAP VLTQASEVYT SVIFQLFQEE YEEFQSAYIV SRDESGPCRE  540
YVVSLVEKED CRYTVYGNPM EQTVACSCGK FEMVGFLCSH ALKILDVMDI KYIPDRYIMK  600
RWTKYARRLT SSSLEVPVPG QAVQEEESLE ISSNRYQHLC PKYVRLVARA SECEESSRVL  660
DQFWGELGDK VEQILQKQTS VSSAPVTLQP DVQNLKMALS SITDGTESEN VLDISSRAVA  720
ETVKKKGQKS KNHPRNCVEK GLTKKQKVHS EEPALVHYGL ADGSAQSGNA MF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-74	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG078450.6