PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG076940.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 513aa MW: 55948 Da PI: 6.1177

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG076940.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	5.9e-17	58	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE+e++++a k++G W+ I +++g ++t+ q++s+ qk+ TRIDC7AG076940.7 58 REKWTEEEHEKFLEALKLYGRS-WRQIQEHIG-TKTAVQIRSHAQKF 102 789***************55.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
GDGSWLPWRS RRERDAMDSS RMPIGKGLSV DVAMEPNEEG MGEHPVKPRK PYTITKQREK 60 WTEEEHEKFL EALKLYGRSW RQIQEHIGTK TAVQIRSHAQ KFFSKVVREP GAKIEIEIPP 120 PRPKRKPLHP YPRKRANSCN GANPANGQSK LAQISSSSGS DQENGSPVSV LSAMQSDAFG 180 SSMSNPSSRS TSPESSDEEN NVPPMVSEEE GQQTGIDQSH KEADQENIDM GTSEEDSSDE 240 VQVTSVKLFG KTVVIPDPRK RCSPDTGSGH ENGEQTSQSS NIGTSQAPLA VEIPTHTKGG 300 QISQSSNKAT SQAPLAVEVP TYTNGEQISE FSYKATSQAP LAVEVPTCTN GEQISEFSYK 360 ATSQAPLAVE IQAYAAPPSA WVLPYNSFPL HFGESAEARI ARLHMWWPYY GFPMVHPSGP 420 SAVAHNGKVT DESEAAKSPP VESSLDFVDN TQATASKQWK VLESLGTAQA PPSASNFQLK 480 PSTNSAFVRV KPIISSGDEP VRGFTPYKRC RVE

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

GDGSWLPWRS RRERDAMDSS RMPIGKGLSV DVAMEPNEEG MGEHPVKPRK PYTITKQREK  60
WTEEEHEKFL EALKLYGRSW RQIQEHIGTK TAVQIRSHAQ KFFSKVVREP GAKIEIEIPP  120
PRPKRKPLHP YPRKRANSCN GANPANGQSK LAQISSSSGS DQENGSPVSV LSAMQSDAFG  180
SSMSNPSSRS TSPESSDEEN NVPPMVSEEE GQQTGIDQSH KEADQENIDM GTSEEDSSDE  240
VQVTSVKLFG KTVVIPDPRK RCSPDTGSGH ENGEQTSQSS NIGTSQAPLA VEIPTHTKGG  300
QISQSSNKAT SQAPLAVEVP TYTNGEQISE FSYKATSQAP LAVEVPTCTN GEQISEFSYK  360
ATSQAPLAVE IQAYAAPPSA WVLPYNSFPL HFGESAEARI ARLHMWWPYY GFPMVHPSGP  420
SAVAHNGKVT DESEAAKSPP VESSLDFVDN TQATASKQWK VLESLGTAQA PPSASNFQLK  480
PSTNSAFVRV KPIISSGDEP VRGFTPYKRC RVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37260.1	2e-36	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG076940.7