PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG076940.11 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 298aa MW: 32529.8 Da PI: 5.6668 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.5 | 2.8e-17 | 42 | 86 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE+e++++a k++G W+ I +++g ++t+ q++s+ qk+ TRIDC7AG076940.11 42 REKWTEEEHEKFLEALKLYGRS-WRQIQEHIG-TKTAVQIRSHAQKF 86 789*****************55.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MDSSRMPIGK GLSVDVAMEP NEEGMGEHPV KPRKPYTITK QREKWTEEEH EKFLEALKLY 60 GRSWRQIQEH IGTKTAVQIR SHAQKFFSKV VREPGAKIEI EIPPPRPKRK PLHPYPRKRA 120 NSCNGANPAN GQSKLAQISS SSGSDQENGS PVSVLSAMQS DAFGSSMSNP SSRSTSPESS 180 DEENNVPPMV SEEEGQQTGI DQSHKEADQE NIDMGTSEED SSDEVQVTSV KLFGKTVVIP 240 DPRKRCSPDT GSGHENGEQT SQSSNIGTSQ APLAVEIPTH TKGGNGEQIS EFSYKATS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G37260.1 | 2e-38 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG076940.11 |