PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG076940.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 497aa MW: 54021.9 Da PI: 5.9661

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG076940.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.7e-17	42	86	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE+e++++a k++G W+ I +++g ++t+ q++s+ qk+ TRIDC7AG076940.1 42 REKWTEEEHEKFLEALKLYGRS-WRQIQEHIG-TKTAVQIRSHAQKF 86 789***************55.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MDSSRMPIGK GLSVDVAMEP NEEGMGEHPV KPRKPYTITK QREKWTEEEH EKFLEALKLY 60 GRSWRQIQEH IGTKTAVQIR SHAQKFFSKV VREPGAKIEI EIPPPRPKRK PLHPYPRKRA 120 NSCNGANPAN GQSKLAQISS SSGSDQENGS PVSVLSAMQS DAFGSSMSNP SSRSTSPESS 180 DEENNVPPMV SEEEGQQTGI DQSHKEADQE NIDMGTSEED SSDEVQVTSV KLFGKTVVIP 240 DPRKRCSPDT GSGHENGEQT SQSSNIGTSQ APLAVEIPTH TKGGQISQSS NKATSQAPLA 300 VEVPTYTNGE QISEFSYKAT SQAPLAVEVP TCTNGEQISE FSYKATSQAP LAVEIQAYAA 360 PPSAWVLPYN SFPLHFGESA EARIARLHMW WPYYGFPMVH PSGPSAVAHN GKVTDESEAA 420 KSPPVESSLD FVDNTQATAS KQWKVLESLG TAQAPPSASN FQLKPSTNSA FVRVKPIISS 480 GDEPVRGFTP YKRCRVE

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MDSSRMPIGK GLSVDVAMEP NEEGMGEHPV KPRKPYTITK QREKWTEEEH EKFLEALKLY  60
GRSWRQIQEH IGTKTAVQIR SHAQKFFSKV VREPGAKIEI EIPPPRPKRK PLHPYPRKRA  120
NSCNGANPAN GQSKLAQISS SSGSDQENGS PVSVLSAMQS DAFGSSMSNP SSRSTSPESS  180
DEENNVPPMV SEEEGQQTGI DQSHKEADQE NIDMGTSEED SSDEVQVTSV KLFGKTVVIP  240
DPRKRCSPDT GSGHENGEQT SQSSNIGTSQ APLAVEIPTH TKGGQISQSS NKATSQAPLA  300
VEVPTYTNGE QISEFSYKAT SQAPLAVEVP TCTNGEQISE FSYKATSQAP LAVEIQAYAA  360
PPSAWVLPYN SFPLHFGESA EARIARLHMW WPYYGFPMVH PSGPSAVAHN GKVTDESEAA  420
KSPPVESSLD FVDNTQATAS KQWKVLESLG TAQAPPSASN FQLKPSTNSA FVRVKPIISS  480
GDEPVRGFTP YKRCRVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37260.1	1e-36	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG076940.1