PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072790.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 787aa MW: 85086.4 Da PI: 7.979

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072790.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	22.2	3e-07	105	122	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7AG072790.6 105 CGVHRCKVTCHEGECPPC 122 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence
EVNFPAQCFC GKKTETLLCG EMVLKGKLSN KDGVFSCSEV CGHNLACRNH ACQDVCHPGP 60 CGECELLPGK VTTCHCGKTR LQEKRASCLD PIPTCDKVCD KRLPCGVHRC KVTCHEGECP 120 PCLVRVEQRC RCGSSGQMVE CYKVSMEEFR CNKPCGRKKN CGRHRCSECC CPLSKPFAQH 180 QGDSMDPHFC QIPCGKKLRC GQHGCQHLCH SGHCDPCRET IFHDLTCACG RTSIPPPQPC 240 GTPTPSCPHQ CMVPQPCGHP ASHQCHFGDC PPCVVPVTRE CVGGHVMLRN IPCGSKDIRC 300 NQPCGKNRQC GLHACARTCH PAPCDPPPAN GEASSSSGGR VSCGQLCGVP RRECKHTCNA 360 PCHPSSPCPD VRCEHRVTIT CSCGRITTAV PCSAGGAYNG DSAFDISVMQ QLPMPLQPVE 420 SNGKRVPLGQ RKLCCDEECA KMERKRVLAE AFDITPPNLD ALHFGENSNA SDLLSDLFRR 480 EPKWVLAIEE RCKFLVLGKT KGNSSSNIKF HVFCHMMKDK RDAIRLIADR WKLSVQAVGW 540 EPKRFITVHV TPKSKVPARV LGSKPGVPVS ASHPYFDPMV DMDPRLVVAM LDLPRDADVS 600 SLVLRFGGEC ELVWLNDKNA AAVFSDPARA ATALRRLDYG SAYQGAAMFC PSSITQASVP 660 SNVWIGAQRD GGLAAKSSAN PWKASQSEPD PSGDWTVLSH ASGSVWKRGD TPAQVMGSSN 720 RWNALESDAA TSSGPTNKRK PPLRTETGSS SSAPRVGAGS SAAPSAGQSV SKLQPDVEVE 780 DWEESCE

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence

EVNFPAQCFC GKKTETLLCG EMVLKGKLSN KDGVFSCSEV CGHNLACRNH ACQDVCHPGP  60
CGECELLPGK VTTCHCGKTR LQEKRASCLD PIPTCDKVCD KRLPCGVHRC KVTCHEGECP  120
PCLVRVEQRC RCGSSGQMVE CYKVSMEEFR CNKPCGRKKN CGRHRCSECC CPLSKPFAQH  180
QGDSMDPHFC QIPCGKKLRC GQHGCQHLCH SGHCDPCRET IFHDLTCACG RTSIPPPQPC  240
GTPTPSCPHQ CMVPQPCGHP ASHQCHFGDC PPCVVPVTRE CVGGHVMLRN IPCGSKDIRC  300
NQPCGKNRQC GLHACARTCH PAPCDPPPAN GEASSSSGGR VSCGQLCGVP RRECKHTCNA  360
PCHPSSPCPD VRCEHRVTIT CSCGRITTAV PCSAGGAYNG DSAFDISVMQ QLPMPLQPVE  420
SNGKRVPLGQ RKLCCDEECA KMERKRVLAE AFDITPPNLD ALHFGENSNA SDLLSDLFRR  480
EPKWVLAIEE RCKFLVLGKT KGNSSSNIKF HVFCHMMKDK RDAIRLIADR WKLSVQAVGW  540
EPKRFITVHV TPKSKVPARV LGSKPGVPVS ASHPYFDPMV DMDPRLVVAM LDLPRDADVS  600
SLVLRFGGEC ELVWLNDKNA AAVFSDPARA ATALRRLDYG SAYQGAAMFC PSSITQASVP  660
SNVWIGAQRD GGLAAKSSAN PWKASQSEPD PSGDWTVLSH ASGSVWKRGD TPAQVMGSSN  720
RWNALESDAA TSSGPTNKRK PPLRTETGSS SSAPRVGAGS SAAPSAGQSV SKLQPDVEVE  780
DWEESCE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072790.6