PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072790.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 996aa MW: 107932 Da PI: 8.0273

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072790.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.9	3.9e-07	314	331	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7AG072790.3 314 CGVHRCKVTCHEGECPPC 331 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 996 aa Download sequence
GGTVPQLVQE IQDKLARGAV ECMICYDMVR RSAPVWSCGS CFSIFHLPCI RKWARSPASV 60 SDASAPASDA WRCPGCQSVQ DVRARDIAYT CFCRRRRDPP NDLFLTPHSC GEPCSKPLGK 120 ADPAAKGDDD DDVATRCPHV CVLQCHPGPC PPCKAFAPER PCPCGKQSIT RRCADRSTPV 180 TCGQRCEKLL PCRRHRCEKV CHTGPCGDCE VNFPAQCFCG KKTETLLCGE MVLKGKLSNK 240 DGVFSCSEVC GHNLACRNHA CQDVCHPGPC GECELLPGKV TTCHCGKTRL QEKRASCLDP 300 IPTCDKVCDK RLPCGVHRCK VTCHEGECPP CLVRVEQRCR CGSSGQMVEC YKVSMEEFRC 360 NKPCGRKKNC GRHRCSECCC PLSKPFAQHQ GDSMDPHFCQ IPCGKKLRCG QHGCQHLCHS 420 GHCDPCRETI FHDLTCACGR TSIPPPQPCG TPTPSCPHQC MVPQPCGHPA SHQCHFGDCP 480 PCVVPVTREC VGGHVMLRNI PCGSKDIRCN QPCGKNRQCG LHACARTCHP APCDPPPANG 540 EASSSSGGRV SCGQLCGVPR RECKHTCNAP CHPSSPCPDV RCEHRVTITC SCGRITTAVP 600 CSAGGAYNGD SAFDISVMQQ LPMPLQPVES NGKRVPLGQR KLCCDEECAK MERKRVLAEA 660 FDITPPNLDA LHFGENSNAS DLLSDLFRRE PKWVLAIEER CKFLVLGKTK GNSSSNIKFH 720 VFCHMMKDKR DAIRLIADRW KLSVQAVGWE PKRFITVHVT PKSKVPARVL GSKPGVPVSA 780 SHPYFDPMVD MDPRLVVAML DLPRDADVSS LVLRFGGECE LVWLNDKNAA AVFSDPARAA 840 TALRRLDYGS AYQGAAMFCP SSITQASVPS NVWIGAQRDG GLAAKSSANP WKASQSEPDP 900 SGDWTVLSHA SGSVWKRGDT PAQVMGSSNR WNALESDAAT SSGPTNKRKP PLRTETGSSS 960 SAPRVGAGSS AAPSAGQSVS KLQPDVEVED WEESCE

Sequence ? help Back to Top

Protein Sequence Length: 996 aa Download sequence

GGTVPQLVQE IQDKLARGAV ECMICYDMVR RSAPVWSCGS CFSIFHLPCI RKWARSPASV  60
SDASAPASDA WRCPGCQSVQ DVRARDIAYT CFCRRRRDPP NDLFLTPHSC GEPCSKPLGK  120
ADPAAKGDDD DDVATRCPHV CVLQCHPGPC PPCKAFAPER PCPCGKQSIT RRCADRSTPV  180
TCGQRCEKLL PCRRHRCEKV CHTGPCGDCE VNFPAQCFCG KKTETLLCGE MVLKGKLSNK  240
DGVFSCSEVC GHNLACRNHA CQDVCHPGPC GECELLPGKV TTCHCGKTRL QEKRASCLDP  300
IPTCDKVCDK RLPCGVHRCK VTCHEGECPP CLVRVEQRCR CGSSGQMVEC YKVSMEEFRC  360
NKPCGRKKNC GRHRCSECCC PLSKPFAQHQ GDSMDPHFCQ IPCGKKLRCG QHGCQHLCHS  420
GHCDPCRETI FHDLTCACGR TSIPPPQPCG TPTPSCPHQC MVPQPCGHPA SHQCHFGDCP  480
PCVVPVTREC VGGHVMLRNI PCGSKDIRCN QPCGKNRQCG LHACARTCHP APCDPPPANG  540
EASSSSGGRV SCGQLCGVPR RECKHTCNAP CHPSSPCPDV RCEHRVTITC SCGRITTAVP  600
CSAGGAYNGD SAFDISVMQQ LPMPLQPVES NGKRVPLGQR KLCCDEECAK MERKRVLAEA  660
FDITPPNLDA LHFGENSNAS DLLSDLFRRE PKWVLAIEER CKFLVLGKTK GNSSSNIKFH  720
VFCHMMKDKR DAIRLIADRW KLSVQAVGWE PKRFITVHVT PKSKVPARVL GSKPGVPVSA  780
SHPYFDPMVD MDPRLVVAML DLPRDADVSS LVLRFGGECE LVWLNDKNAA AVFSDPARAA  840
TALRRLDYGS AYQGAAMFCP SSITQASVPS NVWIGAQRDG GLAAKSSANP WKASQSEPDP  900
SGDWTVLSHA SGSVWKRGDT PAQVMGSSNR WNALESDAAT SSGPTNKRKP PLRTETGSSS  960
SAPRVGAGSS AAPSAGQSVS KLQPDVEVED WEESCE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072790.3