PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072430.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 513aa MW: 55128.8 Da PI: 8.2354

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072430.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	17.7	7.8e-06	33	49	1	17
zf-NF-X1 1 CGkHkCqklCHeGpCpp 17 CG H C ++CH+ pC+p TRIDC7AG072430.3 33 CGLHACARPCHPSPCDP 49 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MRECVGGHVM LRNIPCGSKD IRCNQPCGKN RQCGLHACAR PCHPSPCDPP PTNGEASSSS 60 GGKVSCGQLC GVPRRECKHT CNAPCHPSSP CPDVRCEHRA TITCSCGRIS TTVPCSAGGA 120 YNGDSTFDIS VIQQLPMPLQ PVESNGKRVP LGQRKLCCDE ECAKVERKRV LAEAFDITQP 180 NLDALHFGEN SNASDLVSDL FRREPKWVLA IEERCKFLVL GKTRGNSSSN MKFHVFCHMM 240 KDKRDAIRLI ADRWKLSVQA VGWEPKRFVT VHVTPKSKVP ARVLGSKPGV PVSAAHPYFD 300 PMVDMDPRLV VAMLDLPRDA DVNSLVLRFG GECELVWLND KNAAAVFSDP ARAATALRRL 360 DYGSAYQGAA MFCPSSITQA SLSSNVWVGA PRDGGLAAVS SASPWKKDSP SELKPNPHAV 420 MTVLGRAPGT SVLGHSPGSV WKPAVQVTSS NRWNALESDA ATSSGSTDKP KPRLRTDTGS 480 STSAPGVGAE PSAGQSVSKL QPDIEVEDWE EIV

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MRECVGGHVM LRNIPCGSKD IRCNQPCGKN RQCGLHACAR PCHPSPCDPP PTNGEASSSS  60
GGKVSCGQLC GVPRRECKHT CNAPCHPSSP CPDVRCEHRA TITCSCGRIS TTVPCSAGGA  120
YNGDSTFDIS VIQQLPMPLQ PVESNGKRVP LGQRKLCCDE ECAKVERKRV LAEAFDITQP  180
NLDALHFGEN SNASDLVSDL FRREPKWVLA IEERCKFLVL GKTRGNSSSN MKFHVFCHMM  240
KDKRDAIRLI ADRWKLSVQA VGWEPKRFVT VHVTPKSKVP ARVLGSKPGV PVSAAHPYFD  300
PMVDMDPRLV VAMLDLPRDA DVNSLVLRFG GECELVWLND KNAAAVFSDP ARAATALRRL  360
DYGSAYQGAA MFCPSSITQA SLSSNVWVGA PRDGGLAAVS SASPWKKDSP SELKPNPHAV  420
MTVLGRAPGT SVLGHSPGSV WKPAVQVTSS NRWNALESDA ATSSGSTDKP KPRLRTDTGS  480
STSAPGVGAE PSAGQSVSKL QPDIEVEDWE EIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	1e-170	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072430.3