PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG069500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | CO-like | ||||||||
Protein Properties | Length: 372aa MW: 39477.5 Da PI: 6.3669 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 18.4 | 4.4e-06 | 13 | 53 | 4 | 40 |
zf-B_box 4 rkCpeHee.kelqlfCedCqqllCedCllee.Hkg..Htvv 40 r+C +e ++ +C+dC +lC C H + H++v TRIDC7AG069500.1 13 RRCGACEGaAPAAVHCRDCAGYLCTGCDARPaHARagHERV 53 79*****8688******************999977889875 PP | |||||||
2 | zf-B_box | 21.8 | 3.9e-07 | 53 | 98 | 3 | 42 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e ++ C+ + lC+ C +H+ H +vp+ TRIDC7AG069500.1 53 VWVCEVCEVSPAAVTCKADAAVLCAVCDADIHHAnplaerHVRVPI 98 689*****999********************644588888988876 PP | |||||||
3 | CCT | 69.6 | 8.2e-24 | 295 | 338 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R a+l+RY+eKrk+R+FeK+irY+sRKa+AesRpRvKGrF+k++ TRIDC7AG069500.1 295 RVARLMRYREKRKNRRFEKTIRYASRKAYAESRPRVKGRFAKRT 338 89****************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MMELRKYWGV GGRRCGACEG AAPAAVHCRD CAGYLCTGCD ARPAHARAGH ERVWVCEVCE 60 VSPAAVTCKA DAAVLCAVCD ADIHHANPLA ERHVRVPIAP IGSPEAAAVA AEAMMFCGAG 120 DGEARADQDD VPEQLHQHGG MLNLNVEAGK EGRKMDYLFS DLVDPYLAVD FTRFAHADSV 180 VPSGVATGAV PAVVDLDFAC GIGAKPPATY SSPYTANASG AHSGSSSEVS VVPEAICGGV 240 GSFEIDFTRP KPQPYMPAYT AAPPSHGVSA QQASPVDMGY LTVPERPVAV TGEGRVARLM 300 RYREKRKNRR FEKTIRYASR KAYAESRPRV KGRFAKRTDQ DADGDDVDAE AHAVPSSTSY 360 LLDFGYGVVP SF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57660.1 | 6e-39 | CO-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG069500.1 |