PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG069150.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 266aa MW: 29027.3 Da PI: 9.863

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG069150.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.4	1.6e-41	30	106	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqve+C+adls ak+yhrrhkvCe h+ka+ v+++g++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk++ TRIDC7AG069150.1 30 RCQVEDCKADLSGAKHYHRRHKVCEYHAKASLVAAAGKQQRFCQQCSRFHVLTEFDEAKRSCRRRLAEHNRRRRKPA 106 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MMAVDRMLMR SRLGGVFGLG FGRAHHQAPR CQVEDCKADL SGAKHYHRRH KVCEYHAKAS 60 LVAAAGKQQR FCQQCSRFHV LTEFDEAKRS CRRRLAEHNR RRRKPAAGST AASSKDSAPP 120 TKKPNAGAIS SSYTADNNTL STTKSTISSN TSAISCLQHG EGRAAAATRP TALTLGAAPE 180 KDDQQQQLRN AMQLHHHQEQ QHFITSLLHN NINNSNILSC SSVSSSTMPS AAAANGEVSD 240 QNNDITNNNG SNNVNNGMHM FEVDFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	105	KRSCRRRLAEHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	2e-30	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG069150.1