PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG066360.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YC | ||||||||
Protein Properties | Length: 234aa MW: 26804.9 Da PI: 4.5597 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 140.2 | 5.4e-44 | 57 | 160 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 ql++ w++q ie++td+knh lP +ri+ki++adedv+misaeaP+l++kace+f le+t rsw+ +ee krr l++sdiaaav+rtd +d TRIDC7AG066360.7 57 QLQQLWAEQrseIEQVTDMKNHPLPPTRIRKIMRADEDVRMISAEAPALFAKACEMFTLEMTTRSWMVTEEDKRRVLQRSDIAAAVARTDDYD 149 799****999999******************************************************************************** PP NF-YC 91 flvdivprdel 101 fl+d r+e+ TRIDC7AG066360.7 150 FLLDLFTREET 160 *****999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MVPTSQPQPP MGDVTPAGSQ PTQEFPGNPA QLSAQEQLMY EQSQEYQLQL QQQLQRQLQQ 60 LWAEQRSEIE QVTDMKNHPL PPTRIRKIMR ADEDVRMISA EAPALFAKAC EMFTLEMTTR 120 SWMVTEEDKR RVLQRSDIAA AVARTDDYDF LLDLFTREET KHGVLLRRTG QQPMGTQAGA 180 YPYYYAPQQQ VAGASMAYGG PSTYVWQEPQ VQEQGHAHAS TYVWQEPQQQ QEEP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 3e-38 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG066360.7 |