PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG065680.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 209aa    MW: 22036 Da    PI: 10.2791
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG065680.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.51.3e-1277121147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC7AG065680.9  77 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 121
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MVSMSTTPKP LEAGAAAAAV GGGGGDGGGG GGGKGGKGKE QQQQVAVAAG PPMAVPADAA  60
EDARMKVRKP YTITKSRESW TEPEHDKFLE ALQLFDRDWK KIEAFVGSKT VIQIRSHAQK  120
YFLKVQKNGT GEHLPPPRPK RKAAHPYPQK ASKTAVLPQQ PAPPPPPPRD QDGVNVSMDA  180
SMVVPSTNAN AVVPSWDNAL VQPTQVSHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.24e-46MYB_related family protein