PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG064390.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 324aa    MW: 36836.3 Da    PI: 8.7233
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG064390.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.39.8e-074060526
                      --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                      +C+ +   G+C+ G++C++ H+
  TRIDC7AG064390.2 40 ECNMYKM-GFCPNGPNCRYKHV 60
                      6666666.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
CGFLHQFDKA RMPVCRFFRD YGECREPDCA YKHSYDDVKE CNMYKMGFCP NGPNCRYKHV  60
KLPGPPPPVE EVLAKILQMR SSNFNKFNQH RNNNYNQQGD RPRPPPGSGL PNQNSTDNAS  120
TMQPAAGQQA QTMNQQPQQK QQQVQQQQKP NTNDQVQGVP NGSSNQPTRL ATPLPQGSSR  180
YFIVKSCNRE NLEISVQQGI WATQRSNEAK LNEAFESMDN VILIFSINRT RNFQGCAKMT  240
SRIGGYIGGG NWKSANGTAH YGRNFSLQWL KLCELSFQKT HHLRNPYNDN LPVKISRDCQ  300
ELEPFIGEQL ASLLYLEPDS ELTV