PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG064340.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 742aa MW: 82214.3 Da PI: 6.554

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG064340.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.7	9e-18	6	69	34	99
SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++l +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++++r+ TRIDC7AG064340.8 6 QELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNDNNQLLLGIRRA 69 47899*******************************************..777777899997 PP
2	Auxin_resp	116.7	2e-38	94	177	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k TRIDC7AG064340.8 94 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDDVRWPNSHWRSVK 177 79*******************************9789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MQPPAQELFA KDLHGNEWKF RHIFRGQPKR HLLTTGWSVF VSAKRLVAGD SVLFIWNDNN 60 QLLLGIRRAT RPQTVMPSSV LSSDSMHIGL LAAAAHAAST NSRFTIFYNP RASPCEFVIP 120 LAKYVKAVYH TRISVGMRFR MLFETEESSV RRYMGTITGI SDLDDVRWPN SHWRSVKVGW 180 DESTAGERQP RVSLWEIEPL TTFPMYPTPF PLRLKRPWPT GLPSLHGGKD DDLTSSLMWL 240 RDSANPGFQS LNFGGAGMNP WMQPRLDASL LGLQPDIYQT MAAAAFQDPT KMSPTMLQFQ 300 QPQNMVGRAT PLLQSQILQQ MQPQFQQQSY LQNMNGTTIQ GQAQSEFLQQ QLQRCQSFNE 360 QKPQLLQQQE SNQQQSQGMQ VPQHQHMQQQ KNMANYQSAY SQLSPGPQSS PTALQTALPF 420 SQSQSFSDTN MSSLSPSGAP AMHNTLGPFS SETASHLSMS RPTAVPVPDS WSSKRVAVES 480 LIPSRPQSTT HMEQLSSTPP SIPQSSALAP LPGRGCLVDQ DGSSDPQNHL LFGVNIDSHS 540 LLMQGGLHDE NDSTAIPYST SNFLSPSQHD FSLDQTLNSS GCLDESGYVP CSHTPDQVNQ 600 PPATFVKVYK SGTYGRSLDI TKFSNYHELR RELGRLFGLE GQLEDPMRSG WQLVFVDREE 660 DVLLVGDDPW QEFVNSVSCI KILSPQEVQQ MGKQGLELLS SAPGKRLGGG GGGSSCDDYA 720 SRQESRSLST GIASVGSVEV EF

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MQPPAQELFA KDLHGNEWKF RHIFRGQPKR HLLTTGWSVF VSAKRLVAGD SVLFIWNDNN  60
QLLLGIRRAT RPQTVMPSSV LSSDSMHIGL LAAAAHAAST NSRFTIFYNP RASPCEFVIP  120
LAKYVKAVYH TRISVGMRFR MLFETEESSV RRYMGTITGI SDLDDVRWPN SHWRSVKVGW  180
DESTAGERQP RVSLWEIEPL TTFPMYPTPF PLRLKRPWPT GLPSLHGGKD DDLTSSLMWL  240
RDSANPGFQS LNFGGAGMNP WMQPRLDASL LGLQPDIYQT MAAAAFQDPT KMSPTMLQFQ  300
QPQNMVGRAT PLLQSQILQQ MQPQFQQQSY LQNMNGTTIQ GQAQSEFLQQ QLQRCQSFNE  360
QKPQLLQQQE SNQQQSQGMQ VPQHQHMQQQ KNMANYQSAY SQLSPGPQSS PTALQTALPF  420
SQSQSFSDTN MSSLSPSGAP AMHNTLGPFS SETASHLSMS RPTAVPVPDS WSSKRVAVES  480
LIPSRPQSTT HMEQLSSTPP SIPQSSALAP LPGRGCLVDQ DGSSDPQNHL LFGVNIDSHS  540
LLMQGGLHDE NDSTAIPYST SNFLSPSQHD FSLDQTLNSS GCLDESGYVP CSHTPDQVNQ  600
PPATFVKVYK SGTYGRSLDI TKFSNYHELR RELGRLFGLE GQLEDPMRSG WQLVFVDREE  660
DVLLVGDDPW QEFVNSVSCI KILSPQEVQQ MGKQGLELLS SAPGKRLGGG GGGSSCDDYA  720
SRQESRSLST GIASVGSVEV EF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	1e-170	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG064340.8