PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG064340.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 864aa    MW: 95542.2 Da    PI: 6.4035
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG064340.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.14e-2495191199
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                       f+k+lt sd++++g +++p++ ae+    +++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +
  TRIDC7AG064340.7  95 FCKTLTASDTSTHGGFSVPRRAAEKVfpPLPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNDNNQ 183
                       99************************98888776..7************************************************..777777 PP

                       .EEEEE-S CS
                B3  92 lvvkvfrk 99 
                       l+++++r+
  TRIDC7AG064340.7 184 LLLGIRRA 191
                       8**99997 PP
2Auxin_resp116.42.5e-38216299183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7AG064340.7 216 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDDVRWPNSHWRSVK 299
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 864 aa     Download sequence    
VSLPAVGSRV VYFPQGHSEQ VAASTNKEIE SQIPNYPNLP PQLICQLHNV TMHADAETDE  60
VYAQMTLQPL NPQELKDPYL PAELGTANKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAEKV  120
FPPLPPAQEL FAKDLHGNEW KFRHIFRGQP KRHLLTTGWS VFVSAKRLVA GDSVLFIWND  180
NNQLLLGIRR ATRPQTVMPS SVLSSDSMHI GLLAAAAHAA STNSRFTIFY NPRASPCEFV  240
IPLAKYVKAV YHTRISVGMR FRMLFETEES SVRRYMGTIT GISDLDDVRW PNSHWRSVKV  300
GWDESTAGER QPRVSLWEIE PLTTFPMYPT PFPLRLKRPW PTGLPSLHGG KDDDLTSSLM  360
WLRDSANPGF QSLNFGGAGM NPWMQPRLDA SLLGLQPDIY QTMAAAAFQD PTKMSPTMLQ  420
FQQPQNMVGR ATPLLQSQIL QQMQPQFQQQ SYLQNMNGTT IQGQAQSEFL QQQLQRCQSF  480
NEQKPQLLQQ QESNQQQSQG MQVPQHQHMQ QQKNMANYQS AYSQLSPGPQ SSPTALQTAL  540
PFSQSQSFSD TNMSSLSPSG APAMHNTLGP FSSETASHLS MSRPTAVPVP DSWSSKRVAV  600
ESLIPSRPQS TTHMEQLSST PPSIPQSSAL APLPGRGCLV DQDGSSDPQN HLLFGVNIDS  660
HSLLMQGGLH DENDSTAIPY STSNFLSPSQ HDFSLDQTLN SSGCLDESGY VPCSHTPDQV  720
NQPPATFVKV YKSGTYGRSL DITKFSNYHE LRRELGRLFG LEGQLEDPMR SGWQLVFVDR  780
EEDVLLVGDD PWQEFVNSVS CIKILSPQEV QQMGKQGLEL LSSAPGKRLG GGGGGSSCDD  840
YASRQESRSL STGIASVGSV EVEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein