PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG064340.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 848aa    MW: 93926.4 Da    PI: 6.2858
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG064340.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.56.1e-2474175199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC7AG064340.6  74 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 162
                       99*****************************96555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7AG064340.6 163 NDNNQLLLGIRRA 175
                       777778**99997 PP
2Auxin_resp116.42.4e-38200283183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7AG064340.6 200 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDDVRWPNSHWRSVK 283
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 848 aa     Download sequence    
AASTNKEIES QIPNYPNLPP QLICQLHNVT MHADAETDEV YAQMTLQPLN PQELKDPYLP  60
AELGTANKQP TNYFCKTLTA SDTSTHGGFS VPRRAAEKVF PPLDFTMQPP AQELFAKDLH  120
GNEWKFRHIF RGQPKRHLLT TGWSVFVSAK RLVAGDSVLF IWNDNNQLLL GIRRATRPQT  180
VMPSSVLSSD SMHIGLLAAA AHAASTNSRF TIFYNPRASP CEFVIPLAKY VKAVYHTRIS  240
VGMRFRMLFE TEESSVRRYM GTITGISDLD DVRWPNSHWR SVKVGWDEST AGERQPRVSL  300
WEIEPLTTFP MYPTPFPLRL KRPWPTGLPS LHGGKDDDLT SSLMWLRDSA NPGFQSLNFG  360
GAGMNPWMQP RLDASLLGLQ PDIYQTMAAA AFQDPTKMSP TMLQFQQPQN MVGRATPLLQ  420
SQILQQMQPQ FQQQSYLQNM NGTTIQGQAQ SEFLQQQLQR CQSFNEQKPQ LLQQQESNQQ  480
QSQGMQVPQH QHMQQQKNMA NYQSAYSQLS PGPQSSPTAL QTALPFSQSQ SFSDTNMSSL  540
SPSGAPAMHN TLGPFSSETA SHLSMSRPTA VPVPDSWSSK RVAVESLIPS RPQSTTHMEQ  600
LSSTPPSIPQ SSALAPLPGR GCLVDQDGSS DPQNHLLFGV NIDSHSLLMQ GGLHDENDST  660
AIPYSTSNFL SPSQHDFSLD QTLNSSGCLD ESGYVPCSHT PDQVNQPPAT FVKVYKSGTY  720
GRSLDITKFS NYHELRRELG RLFGLEGQLE DPMRSGWQLV FVDREEDVLL VGDDPWQEFV  780
NSVSCIKILS PQEVQQMGKQ GLELLSSAPG KRLGGGGGGS SCDDYASRQE SRSLSTGIAS  840
VGSVEVEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein