PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG064340.24
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 281aa    MW: 31463 Da    PI: 9.3359
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG064340.24genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B378.19.2e-2597198199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   
  TRIDC7AG064340.24  97 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 184
                        99*****************************96555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC7AG064340.24 185 WNDNNQLLLGIRRA 198
                        7777778***9997 PP
2Auxin_resp73.75.1e-25223281158
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserr 58 
                        aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr
  TRIDC7AG064340.24 223 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRR 281
                        79*********************************9789****************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
PLVSLPAVGS RVVYFPQGHS EQVAASTNKE IESQIPNYPN LPPQLICQLH NVTMHADAET  60
DEVYAQMTLQ PLNPQELKDP YLPAELGTAN KQPTNYFCKT LTASDTSTHG GFSVPRRAAE  120
KVFPPLDFTM QPPAQELFAK DLHGNEWKFR HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS  180
VLFIWNDNNQ LLLGIRRATR PQTVMPSSVL SSDSMHIGLL AAAAHAASTN SRFTIFYNPR  240
ASPCEFVIPL AKYVKAVYHT RISVGMRFRM LFETEESSVR R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein