PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG064340.23
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 215aa    MW: 24236.9 Da    PI: 10.4948
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG064340.23genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3794.9e-2531132199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   
  TRIDC7AG064340.23  31 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 118
                        99*****************************96555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC7AG064340.23 119 WNDNNQLLLGIRRA 132
                        7777778***9997 PP
2Auxin_resp74.43.2e-25157215158
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserr 58 
                        aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr
  TRIDC7AG064340.23 157 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRR 215
                        79*********************************9789****************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MTLQPLNPQE LKDPYLPAEL GTANKQPTNY FCKTLTASDT STHGGFSVPR RAAEKVFPPL  60
DFTMQPPAQE LFAKDLHGNE WKFRHIFRGQ PKRHLLTTGW SVFVSAKRLV AGDSVLFIWN  120
DNNQLLLGIR RATRPQTVMP SSVLSSDSMH IGLLAAAAHA ASTNSRFTIF YNPRASPCEF  180
VIPLAKYVKA VYHTRISVGM RFRMLFETEE SSVRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.21e-135ARF family protein