PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC7AG064340.21 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | ARF | ||||||||
Protein Properties | Length: 733aa MW: 81762 Da PI: 6.1403 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 75.8 | 4.9e-24 | 44 | 145 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+lt sd++++g +++p++ ae+ ++++++ +l +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F TRIDC7AG064340.21 44 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 131 99*****************************96555544..8************************************************.. PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 ++++ +l+++++r+ TRIDC7AG064340.21 132 WNDNNQLLLGIRRA 145 7777778**99997 PP | |||||||
2 | Auxin_resp | 116.7 | 2e-38 | 170 | 253 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k TRIDC7AG064340.21 170 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDDVRWPNSHWRSVK 253 79*********************************9789******************************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 733 aa Download sequence |
MHADAETDEV YAQMTLQPLN PQELKDPYLP AELGTANKQP TNYFCKTLTA SDTSTHGGFS 60 VPRRAAEKVF PPLDFTMQPP AQELFAKDLH GNEWKFRHIF RGQPKRHLLT TGWSVFVSAK 120 RLVAGDSVLF IWNDNNQLLL GIRRATRPQT VMPSSVLSSD SMHIGLLAAA AHAASTNSRF 180 TIFYNPRASP CEFVIPLAKY VKAVYHTRIS VGMRFRMLFE TEESSVRRYM GTITGISDLD 240 DVRWPNSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP MYPTPFPLRL KRPWPTGLRG 300 KDDDLTSSLM WLRDSANPGF QSLNFGGAGM NPWMQPRLDA SLLGLQPDIY QTMAAAAFQD 360 PTKMSPTMLQ FQQPQNMVGR ATPLLQSQIL QQMQPQFQQQ SYLQNMNGTT IQGQAQSEFL 420 QQQLQRCQSF NEQKPQLLQQ QESNQQQSQG PQSSPTALQT ALPFSQSQSF SDTNMSSLSP 480 SGAPAMHNTL GPFSSETASH LSMSRPTAVP VPDSWSSKRV AVESLIPSRP QSTTHMEQLS 540 STPPSIPQSS ALAPLPGRGC LVDQDGSSDP QNHLLFGVNI DSHSLLMQGG LHDENDSTAI 600 PYSTSNFLSP SQHDFSLDQT LNSSGCLDES GYVPCSHTPD QVYKSGTYGR SLDITKFSNY 660 HELRRELGRL FGLEGQLEDP MRSGWQLVFV DREEDVLLVG DDPWQEFVNS VSCIKILSPQ 720 EVQQMGKQGL ELL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G30330.1 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC7AG064340.21 |