PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG064340.19 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 721aa MW: 80306.5 Da PI: 6.5552 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 75.8 | 4.8e-24 | 44 | 145 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+lt sd++++g +++p++ ae+ ++++++ +l +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F TRIDC7AG064340.19 44 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 131 99*****************************96555544..8************************************************.. PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 ++++ +l+++++r+ TRIDC7AG064340.19 132 WNDNNQLLLGIRRA 145 7777778**99997 PP | |||||||
2 | Auxin_resp | 116.7 | 2e-38 | 170 | 253 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k TRIDC7AG064340.19 170 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDDVRWPNSHWRSVK 253 79*********************************9789******************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 721 aa Download sequence |
MHADAETDEV YAQMTLQPLN PQELKDPYLP AELGTANKQP TNYFCKTLTA SDTSTHGGFS 60 VPRRAAEKVF PPLDFTMQPP AQELFAKDLH GNEWKFRHIF RGQPKRHLLT TGWSVFVSAK 120 RLVAGDSVLF IWNDNNQLLL GIRRATRPQT VMPSSVLSSD SMHIGLLAAA AHAASTNSRF 180 TIFYNPRASP CEFVIPLAKY VKAVYHTRIS VGMRFRMLFE TEESSVRRYM GTITGISDLD 240 DVRWPNSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP MYPTPFPLRL KRPWPTGLRG 300 KDDDLTSSLM WLRDSANPGF QSLNFGGAGM NPWMQPRLDA SLLGLQPDIY QTMAAAAFQD 360 PTKMSPTMLQ FQQPQNMVGR ATPLLQSQIL QQMQPQFQQQ SYLQNMNGTT IQESNQQQSQ 420 GMQVPQHQHM QQQKNMANYQ SAYSQLSPGP QSSPTALQTA LPFSQSQSFS DTNMSSLSPS 480 GAPAMHNTLG PFSSETASHL SMSRPTAVPV PDSWSSKRVA VESLIPSRPQ STTHMEQLSS 540 TPPSIPQSSA LAPLPGRGCL VDQDGSSDPQ NHLLFGVNID SHSLLMQGGL HDENDSTTLN 600 SSGCLDESGY VPCSHTPDQV NQPPATFVKV YKSGTYGRSL DITKFSNYHE LRRELGRLFG 660 LEGQLEDPMR SGWQLVFVDR EEDVLLVGDD PWQEFVNSVS CIKILSPQEV QQMGKQGLEL 720 L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30330.2 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG064340.19 |