PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG064340.16
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 896aa    MW: 99161.3 Da    PI: 6.2774
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG064340.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.46.6e-24122223199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   
  TRIDC7AG064340.16 122 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 209
                        99*****************************96555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC7AG064340.16 210 WNDNNQLLLGIRRA 223
                        7777778**99997 PP
2Auxin_resp116.32.6e-38248331183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7AG064340.16 248 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDDVRWPNSHWRSVK 331
                        79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 896 aa     Download sequence    
NLAYFPSIAE EHKCLNSELW HACAGPLVSL PAVGSRVVYF PQGHSEQVAA STNKEIESQI  60
PNYPNLPPQL ICQLHNVTMH ADAETDEVYA QMTLQPLNPQ ELKDPYLPAE LGTANKQPTN  120
YFCKTLTASD TSTHGGFSVP RRAAEKVFPP LDFTMQPPAQ ELFAKDLHGN EWKFRHIFRG  180
QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW NDNNQLLLGI RRATRPQTVM PSSVLSSDSM  240
HIGLLAAAAH AASTNSRFTI FYNPRASPCE FVIPLAKYVK AVYHTRISVG MRFRMLFETE  300
ESSVRRYMGT ITGISDLDDV RWPNSHWRSV KVGWDESTAG ERQPRVSLWE IEPLTTFPMY  360
PTPFPLRLKR PWPTGLPSLH GGKDDDLTSS LMWLRDSANP GFQSLNFGGA GMNPWMQPRL  420
DASLLGLQPD IYQTMAAAAF QDPTKMSPTM LQFQQPQNMV GRATPLLQSQ ILQQMQPQFQ  480
QQSYLQNMNG TTIQGQAQSE FLQQQLQRCQ SFNEQKPQLL QQQESNQQQS QGMQVPQHQH  540
MQQQKNMANY QSAYSQLSPG PQSSPTALQT ALPFSQSQSF SDTNMSSLSP SGAPAMHNTL  600
GPFSSETASH LSMSRPTAVP VPDSWSSKRV AVESLIPSRP QSTTHMEQLS STPPSIPQSS  660
ALAPLPGRGC LVDQDGSSDP QNHLLFGVNI DSHSLLMQGG LHDENDSTAI PYSTSNFLSP  720
SQHDFSLDQT LNSSGCLDES GYVPCSHTPD QVNQPPATFV KVYKSGTYGR SLDITKFSNY  780
HELRRELGRL FGLEGQLEDP MRSGWQLVFV DREEDVLLVG DDPWQEFVNS VSCIKILSPQ  840
EVQQMGKQGL ELLSSAPGKR LGGGGGGSSC DDYASRQESR SLSTGIASVG SVEVEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein