PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG064340.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 909aa    MW: 100313 Da    PI: 6.2779
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG064340.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.46.7e-24135236199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   
  TRIDC7AG064340.13 135 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 222
                        99*****************************96555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC7AG064340.13 223 WNDNNQLLLGIRRA 236
                        7777778**99997 PP
2Auxin_resp116.32.7e-38261344183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7AG064340.13 261 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDDVRWPNSHWRSVK 344
                        79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 909 aa     Download sequence    
MRLSSPAGAV LPAQAPPSPE VAEEHKCLNS ELWHACAGPL VSLPAVGSRV VYFPQGHSEQ  60
VAASTNKEIE SQIPNYPNLP PQLICQLHNV TMHADAETDE VYAQMTLQPL NPQELKDPYL  120
PAELGTANKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAEKV FPPLDFTMQP PAQELFAKDL  180
HGNEWKFRHI FRGQPKRHLL TTGWSVFVSA KRLVAGDSVL FIWNDNNQLL LGIRRATRPQ  240
TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNPRAS PCEFVIPLAK YVKAVYHTRI  300
SVGMRFRMLF ETEESSVRRY MGTITGISDL DDVRWPNSHW RSVKVGWDES TAGERQPRVS  360
LWEIEPLTTF PMYPTPFPLR LKRPWPTGLP SLHGGKDDDL TSSLMWLRDS ANPGFQSLNF  420
GGAGMNPWMQ PRLDASLLGL QPDIYQTMAA AAFQDPTKMS PTMLQFQQPQ NMVGRATPLL  480
QSQILQQMQP QFQQQSYLQN MNGTTIQGQA QSEFLQQQLQ RCQSFNEQKP QLLQQQESNQ  540
QQSQGMQVPQ HQHMQQQKNM ANYQSAYSQL SPGPQSSPTA LQTALPFSQS QSFSDTNMSS  600
LSPSGAPAMH NTLGPFSSET ASHLSMSRPT AVPVPDSWSS KRVAVESLIP SRPQSTTHME  660
QLSSTPPSIP QSSALAPLPG RGCLVDQDGS SDPQNHLLFG VNIDSHSLLM QGGLHDENDS  720
TAIPYSTSNF LSPSQHDFSL DQTLNSSGCL DESGYVPCSH TPDQVNQPPA TFVKVYKSGT  780
YGRSLDITKF SNYHELRREL GRLFGLEGQL EDPMRSGWQL VFVDREEDVL LVGDDPWQEF  840
VNSVSCIKIL SPQEVQQMGK QGLELLSSAP GKRLGGGGGG SSCDDYASRQ ESRSLSTGIA  900
SVGSVEVEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein