PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG062040.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 648aa MW: 70184.9 Da PI: 8.3493

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG062040.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77	2.1e-24	94	195	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g +W++++iyr++++r++lt+GW++Fv++++L +gD++vF+ + TRIDC7AG062040.5 94 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFM--R 182 89**************************996555555..8999*****************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 ++++ l+v+++r+ TRIDC7AG062040.5 183 TENGDLCVGIRRA 195 588999**997 PP
2	Auxin_resp	118.3	6.4e-39	254	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++F+v+Y+Prast+eF+v+++ v++a+++++++GmRfkmafetedss++++ +Gtv++v+ +dp+rWpnS+Wr+L+ TRIDC7AG062040.5 254 AANLAASGQPFDVLYYPRASTPEFCVRAAAVRAAMRTQWCPGMRFKMAFETEDSSRISWfMGTVSAVQVADPIRWPNSPWRLLQ 337 7899******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence
MVQMPPPGSR VYYFPQGHAE HAQGQAGAVD FPPGARLQAL VLCRVAAVRF MADPDTDEVF 60 AKIRLVPARS QDAADADDAI AAAAAAQEDK PASFAKTLTQ SDANNGGGFS VPRYCAETIF 120 PRLDYSADPP VQTVLAKDVH GVVWKFRHIY RGTPRRHLLT TGWSSFVNQK KLVAGDSIVF 180 MRTENGDLCV GIRRAKKGRI GGPELLPPPS PAAGGNYGGF SMFLRGEEDG GGNKMMGARG 240 KARVRVRPEE VAEAANLAAS GQPFDVLYYP RASTPEFCVR AAAVRAAMRT QWCPGMRFKM 300 AFETEDSSRI SWFMGTVSAV QVADPIRWPN SPWRLLQVTW DEPDLLQNVK RVSPWLVELV 360 SNMPAIHLAP FSPPRKKLCV PFYPDLPADG QFPAPMFHGN PLGRGGGVGP MCYFPDGTPA 420 GIQGARHAQF GIPLSDLHLN KLQSSLSPHG LHQVDHGGQP PRIAAGLIIG HPAARDDISC 480 MLTIGSHQNN NNNKSDVKKA SPQLMLFGKP ILTEQQITLG NSGGFSPSAA RKSSSEMSAE 540 KSANNSDLPS PQSNQNGTTK NLSCGGVPLC QDNKVLDLGL DIGHCKIFMQ SEDVGRTLDL 600 TAVGSYEELY RRLSDMFGME KAELMSHVFY RDAAGALKHT GDEPFRFV

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence

MVQMPPPGSR VYYFPQGHAE HAQGQAGAVD FPPGARLQAL VLCRVAAVRF MADPDTDEVF  60
AKIRLVPARS QDAADADDAI AAAAAAQEDK PASFAKTLTQ SDANNGGGFS VPRYCAETIF  120
PRLDYSADPP VQTVLAKDVH GVVWKFRHIY RGTPRRHLLT TGWSSFVNQK KLVAGDSIVF  180
MRTENGDLCV GIRRAKKGRI GGPELLPPPS PAAGGNYGGF SMFLRGEEDG GGNKMMGARG  240
KARVRVRPEE VAEAANLAAS GQPFDVLYYP RASTPEFCVR AAAVRAAMRT QWCPGMRFKM  300
AFETEDSSRI SWFMGTVSAV QVADPIRWPN SPWRLLQVTW DEPDLLQNVK RVSPWLVELV  360
SNMPAIHLAP FSPPRKKLCV PFYPDLPADG QFPAPMFHGN PLGRGGGVGP MCYFPDGTPA  420
GIQGARHAQF GIPLSDLHLN KLQSSLSPHG LHQVDHGGQP PRIAAGLIIG HPAARDDISC  480
MLTIGSHQNN NNNKSDVKKA SPQLMLFGKP ILTEQQITLG NSGGFSPSAA RKSSSEMSAE  540
KSANNSDLPS PQSNQNGTTK NLSCGGVPLC QDNKVLDLGL DIGHCKIFMQ SEDVGRTLDL  600
TAVGSYEELY RRLSDMFGME KAELMSHVFY RDAAGALKHT GDEPFRFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG062040.5