PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG062040.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 701aa MW: 75996.4 Da PI: 8.258

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG062040.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.8	2.3e-24	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g +W++++iyr++++r++lt+GW++Fv++++L +gD++vF+ + TRIDC7AG062040.3 126 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFM--R 214 89**************************996555555..8999*****************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 ++++ l+v+++r+ TRIDC7AG062040.3 215 TENGDLCVGIRRA 227 588999**997 PP
2	Auxin_resp	118.1	7.2e-39	286	369	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++F+v+Y+Prast+eF+v+++ v++a+++++++GmRfkmafetedss++++ +Gtv++v+ +dp+rWpnS+Wr+L+ TRIDC7AG062040.3 286 AANLAASGQPFDVLYYPRASTPEFCVRAAAVRAAMRTQWCPGMRFKMAFETEDSSRISWfMGTVSAVQVADPIRWPNSPWRLLQ 369 7899******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MITFVDSAAG ERERGDGPRC LDPQLWHACA GGMVQMPPPG SRVYYFPQGH AEHAQGQAGA 60 VDFPPGARLQ ALVLCRVAAV RFMADPDTDE VFAKIRLVPA RSQDAADADD AIAAAAAAQE 120 DKPASFAKTL TQSDANNGGG FSVPRYCAET IFPRLDYSAD PPVQTVLAKD VHGVVWKFRH 180 IYRGTPRRHL LTTGWSSFVN QKKLVAGDSI VFMRTENGDL CVGIRRAKKG RIGGPELLPP 240 PSPAAGGNYG GFSMFLRGEE DGGGNKMMGA RGKARVRVRP EEVAEAANLA ASGQPFDVLY 300 YPRASTPEFC VRAAAVRAAM RTQWCPGMRF KMAFETEDSS RISWFMGTVS AVQVADPIRW 360 PNSPWRLLQV TWDEPDLLQN VKRVSPWLVE LVSNMPAIHL APFSPPRKKL CVPFYPDLPA 420 DGQFPAPMFH GNPLGRGGGV GPMCYFPDGT PAGIQGARHA QFGIPLSDLH LNKLQSSLSP 480 HGLHQVDHGG QPPRIAAGLI IGHPAARDDI SCMLTIGSHQ NNNNNKSDVK KASPQLMLFG 540 KPILTEQQIT LGNSGGFSPS AARKSSSEMS AEKSANNSDL PSPQSNQNGT TKNLSCGGVP 600 LCQDNKVLDL GLDIGHCKIF MQSEDVGRTL DLTAVGSYEE LYRRLSDMFG MEKAELMSHV 660 FYRDAAGALK HTGDEPFSDL NITNLNPASI ARPRKWPHLY R

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MITFVDSAAG ERERGDGPRC LDPQLWHACA GGMVQMPPPG SRVYYFPQGH AEHAQGQAGA  60
VDFPPGARLQ ALVLCRVAAV RFMADPDTDE VFAKIRLVPA RSQDAADADD AIAAAAAAQE  120
DKPASFAKTL TQSDANNGGG FSVPRYCAET IFPRLDYSAD PPVQTVLAKD VHGVVWKFRH  180
IYRGTPRRHL LTTGWSSFVN QKKLVAGDSI VFMRTENGDL CVGIRRAKKG RIGGPELLPP  240
PSPAAGGNYG GFSMFLRGEE DGGGNKMMGA RGKARVRVRP EEVAEAANLA ASGQPFDVLY  300
YPRASTPEFC VRAAAVRAAM RTQWCPGMRF KMAFETEDSS RISWFMGTVS AVQVADPIRW  360
PNSPWRLLQV TWDEPDLLQN VKRVSPWLVE LVSNMPAIHL APFSPPRKKL CVPFYPDLPA  420
DGQFPAPMFH GNPLGRGGGV GPMCYFPDGT PAGIQGARHA QFGIPLSDLH LNKLQSSLSP  480
HGLHQVDHGG QPPRIAAGLI IGHPAARDDI SCMLTIGSHQ NNNNNKSDVK KASPQLMLFG  540
KPILTEQQIT LGNSGGFSPS AARKSSSEMS AEKSANNSDL PSPQSNQNGT TKNLSCGGVP  600
LCQDNKVLDL GLDIGHCKIF MQSEDVGRTL DLTAVGSYEE LYRRLSDMFG MEKAELMSHV  660
FYRDAAGALK HTGDEPFSDL NITNLNPASI ARPRKWPHLY R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG062040.3