PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG059260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 219aa MW: 24363.4 Da PI: 9.8094 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.4 | 2.8e-19 | 94 | 149 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rrk+ ++tkeq Le F+ ++ +s+ +++eLA++l+L+ rqV vWFqNrRa+ k TRIDC7AG059260.1 94 RRKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLSSRQVEVWFQNRRARTK 149 79999*************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 113.3 | 1.5e-36 | 95 | 183 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq +lLE sF++++ L++ +K+elar+L+l+ rqv+vWFqnrRARtk+kq+E+d+e+L+r++++l++en+rL++e eL++ TRIDC7AG059260.1 95 RKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLSSRQVEVWFQNRRARTKLKQTEVDCEFLRRWCESLTHENQRLKHELLELQR 183 69***********************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MERQDLGAWL GLATGGGAVW HTHDGERRPN HPVRLDELFP QHGKEERDQD EQKTGGKGAR 60 RKMKVADDEG RSSSSNGPCL SDGGGSDGGG GGGRRKKLRL TKEQCALLEG SFRAHNILSH 120 VQKQELARQL NLSSRQVEVW FQNRRARTKL KQTEVDCEFL RRWCESLTHE NQRLKHELLE 180 LQRSAAPPVA AGSKLFAQLP RAAAIMNLCP SCEKVAVNN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 93 | 100 | GRRKKLRL |
2 | 144 | 152 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 6e-42 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG059260.1 |