PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG057740.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 271aa    MW: 29385.8 Da    PI: 7.9755
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG057740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.79.8e-171462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W++eEd +l+d+++ +G+g +W + + + g++R++k+c++rw++yl
  TRIDC7AG057740.1 14 KGPWSPEEDRKLKDYIHTHGTGgNWIALPTKAGLKRCGKSCRLRWLNYL 62
                      79*********************************************97 PP
2Myb_DNA-binding38.72.3e-1269111246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g +++eEd  +  +++  G++ W+ Ia+ ++ gRt++++k++w++
  TRIDC7AG057740.1  69 GDFSEEEDRVICALFAAIGSR-WSIIAAQLP-GRTDNDVKNYWNT 111
                       689******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MGRAPCCDKG SVKKGPWSPE EDRKLKDYIH THGTGGNWIA LPTKAGLKRC GKSCRLRWLN  60
YLRPNIKHGD FSEEEDRVIC ALFAAIGSRW SIIAAQLPGR TDNDVKNYWN TKLKKKQLHL  120
LIAAAAQSTH GQQYSSRPPA PPFTVEHHHH TSSTSAASLG QLLMFGVGGG DHHQQQQYMS  180
SSSSVDISNN TSAAAAAAAA AGLQESFMFG GLQFQQQEED TNSLLSPAAA ASGNDIMTYE  240
HHEMISPSSF FFYGDGAGGA AATQEGTRFL Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.11e-74MYB family protein