PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG053470.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 229aa    MW: 25805.2 Da    PI: 8.964
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG053470.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.91.3e-28959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krien +nrqvt+skRr gi+KKA EL vLCda+va+i+fsstgk +e++s
  TRIDC7AG053470.3  9 KRIENATNRQVTYSKRRSGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCS 59
                      79***********************************************96 PP
2K-box88.41.4e-2971168198
             K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 
                       yq++ g+sl+ +++e++q+ l+ Lk+ ++nL++e+R+++GedL+ L+++eL+ Leq+++ +lk++R++K++++++q+e+ +kk k  qe+ k+
  TRIDC7AG053470.3  71 YQQAIGTSLWIEQYENMQRTLNHLKDINRNLRTEIRQRMGEDLDALEFEELRDLEQNVDAALKEVRQRKYHVITTQTETYKKKVKHSQEAYKN 163
                       67888999************************************************************************************* PP

             K-box  94 Lrkkl 98 
                       L+++l
  TRIDC7AG053470.3 164 LQQEL 168
                       **986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MGRGKIEIKR IENATNRQVT YSKRRSGIMK KARELTVLCD AQVAIIMFSS TGKYHEFCST  60
GTDIKGIFDR YQQAIGTSLW IEQYENMQRT LNHLKDINRN LRTEIRQRMG EDLDALEFEE  120
LRDLEQNVDA ALKEVRQRKY HVITTQTETY KKKVKHSQEA YKNLQQELGF VDNPAAGGWD  180
GVAAGGWDGV AAVAMGGGSA ADMYAFRVVP SQPNLHGMAY GGSHDLRLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.11e-59MIKC_MADS family protein