PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG052210.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 300aa    MW: 33878.9 Da    PI: 4.1683
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG052210.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.45.8e-09232279653
                       S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
          Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                       +++k qle+Le+++ k++ p+ +++  + + ++L+ + +  WF  rR 
  TRIDC7AG052210.3 232 RLKKAQLETLEKVYFKSKRPTNTMISSIVQVTSLPRKTIIKWFEDRRE 279
                       6789******************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
WEQFRWRYTC RELMRPCLCK SLAVWNKIKN EVVVAEDDID GGDEDDDEGG LEALFKHLEE  60
DLKNDDLSVE DDDDDEISEE DMARFEQVLA EAIGDVDVAD ESAVDLVSGS EVAGNDEAAD  120
PVEPPELKSW QLRRLARAMQ IGRRKTSIKN LAGELGLDRG LVIELLRNPP PELLLMSDSL  180
PDEAPSKPET KEIEPSPVAD EVVVDEIDAT EANPQMDLPV HIMSTEWSAQ KRLKKAQLET  240
LEKVYFKSKR PTNTMISSIV QVTSLPRKTI IKWFEDRREQ DGVPDRRAAY MRSLSETVAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.18e-51HB-other family protein