PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG051770.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 667aa MW: 76501.3 Da PI: 8.003

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG051770.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.3	5.4e-23	83	175	2	90
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn+YA +GF +r+++s+++ k ++ ++++fvC keg+++++k+ ++k++r+r + r gC a+++v ++ +kw++tkl+leH+H ++ TRIDC7AG051770.4 83 FYNAYALGLGFGIRVARSRSErrKGTEVLVMKRFVCMKEGHHKKKKDVdsSNKKKRKRLSIREGCPAMMEVVRRGPEKWVITKLVLEHTHVIV 175 9***********99988874355667899*****9999887666899999********************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 667 aa Download sequence
MEFSSSEDHD LVEDFMDVED DTGTTDVDQG TSVMSSQIHC IDPSEGSMST AVNELLPAAD 60 ELGKNAEPYL GMEFTSDAAA RAFYNAYALG LGFGIRVARS RSERRKGTEV LVMKRFVCMK 120 EGHHKKKKDV DSSNKKKRKR LSIREGCPAM MEVVRRGPEK WVITKLVLEH THVIVSPDKV 180 REVQLLRLSG KEHADQLQEA RRNVFGDTGA SGLFTYLMRR QSENSGFFYN VQVDGRNCLR 240 NAVWVDARSK MSYKYFGDAV YFDTTYTQNV NMLPFAAFTG MNHHGDCVVF GCALILDKTE 300 SSYAWIFETW LTAMDKRLPF SFTTDEGKTM TEAVAKVFPQ CFHRLCRWRV LSKCKKKLSD 360 VYMRFPELHN ELKRCVNECD TVPVFDMFWG SILDKYGLRE NTWLQSLFEA RHKWVPAYLT 420 SSFFAELSLT RRAETISGFY RNNFSTRAPL LSFITTFDQH IDRLYMNEAQ KDLALFPPEQ 480 LLKTNSILEK QAASIYTRAA FEFFQTELIE SLHHYAVKVE ESPYEAKYYV ERDGDPPTRH 540 TVVYNVAEKK AWCDCCRFAF SAILCRHVLG VFILADIDMI PEPCITKRWT KKAKTGPVFV 600 GRILEDENRH TDSVTSRFSD LVRDAMRCGE KGALSEGSFK FAKEVLRKAY REIDKLTKAG 660 PQQVGNR

Sequence ? help Back to Top

Protein Sequence Length: 667 aa Download sequence

MEFSSSEDHD LVEDFMDVED DTGTTDVDQG TSVMSSQIHC IDPSEGSMST AVNELLPAAD  60
ELGKNAEPYL GMEFTSDAAA RAFYNAYALG LGFGIRVARS RSERRKGTEV LVMKRFVCMK  120
EGHHKKKKDV DSSNKKKRKR LSIREGCPAM MEVVRRGPEK WVITKLVLEH THVIVSPDKV  180
REVQLLRLSG KEHADQLQEA RRNVFGDTGA SGLFTYLMRR QSENSGFFYN VQVDGRNCLR  240
NAVWVDARSK MSYKYFGDAV YFDTTYTQNV NMLPFAAFTG MNHHGDCVVF GCALILDKTE  300
SSYAWIFETW LTAMDKRLPF SFTTDEGKTM TEAVAKVFPQ CFHRLCRWRV LSKCKKKLSD  360
VYMRFPELHN ELKRCVNECD TVPVFDMFWG SILDKYGLRE NTWLQSLFEA RHKWVPAYLT  420
SSFFAELSLT RRAETISGFY RNNFSTRAPL LSFITTFDQH IDRLYMNEAQ KDLALFPPEQ  480
LLKTNSILEK QAASIYTRAA FEFFQTELIE SLHHYAVKVE ESPYEAKYYV ERDGDPPTRH  540
TVVYNVAEKK AWCDCCRFAF SAILCRHVLG VFILADIDMI PEPCITKRWT KKAKTGPVFV  600
GRILEDENRH TDSVTSRFSD LVRDAMRCGE KGALSEGSFK FAKEVLRKAY REIDKLTKAG  660
PQQVGNR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	140	KKKKDVDSSNKKKRKR
2	126	141	KKKKDVDSSNKKKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-116	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG051770.4