PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG046890.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 414aa MW: 44581.2 Da PI: 4.258

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG046890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	87.6	1.3e-27	36	134	3	98
NF-YC 3 ksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 +fw ++ +e + df+++ lP++r+k++++a+ed mi+a++P+ l+k celf+ el+lr+w a++ +rr + sdia+a++ t+ +dfl TRIDC7AG046890.1 36 DQFWRERqedMEATVDFNDRILPMSRLKRLIRAEEDGMMIAADTPAYLAKLCELFVQELALRAWACAQSHHRRIILESDIAEAIAFTESYDFL 128 67998766779********************************************************************************** PP NF-YC 93 vdivpr 98 + + TRIDC7AG046890.1 129 ATVLLE 134 987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MGTEQAKEGR GAGEERVVVR TGPRPALPAP QQRAVDQFWR ERQEDMEATV DFNDRILPMS 60 RLKRLIRAEE DGMMIAADTP AYLAKLCELF VQELALRAWA CAQSHHRRII LESDIAEAIA 120 FTESYDFLAT VLLEHQREAR LVGRAATPTT PVVTAARARL ITRKRHMPDP NPRRPVHGVR 180 RIRPRALPVT PTSPPPDVRY VPVPFPFPSA PIGATATAEG LMIIPPINAA TTGRAFFLDM 240 NSGTSFAGEN SAAETMASPP PAGPAGAVAL PSVHPAAYYL CAYPVTNDVE AFAVGNTDPD 300 VIPPEIVVGD VAIPPEIIEG NVADGNGDGG QQQQQTENLG GNGENVVVPQ SNDVQEDGAD 360 GMFLEEILMD EDLMFPDAEL FPLVGAAPDP EDFIVDQDVL DDVFANPSSS ASSD

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MGTEQAKEGR GAGEERVVVR TGPRPALPAP QQRAVDQFWR ERQEDMEATV DFNDRILPMS  60
RLKRLIRAEE DGMMIAADTP AYLAKLCELF VQELALRAWA CAQSHHRRII LESDIAEAIA  120
FTESYDFLAT VLLEHQREAR LVGRAATPTT PVVTAARARL ITRKRHMPDP NPRRPVHGVR  180
RIRPRALPVT PTSPPPDVRY VPVPFPFPSA PIGATATAEG LMIIPPINAA TTGRAFFLDM  240
NSGTSFAGEN SAAETMASPP PAGPAGAVAL PSVHPAAYYL CAYPVTNDVE AFAVGNTDPD  300
VIPPEIVVGD VAIPPEIIEG NVADGNGDGG QQQQQTENLG GNGENVVVPQ SNDVQEDGAD  360
GMFLEEILMD EDLMFPDAEL FPLVGAAPDP EDFIVDQDVL DDVFANPSSS ASSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	9e-24	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG046890.1