PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG043000.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 714aa MW: 76809.4 Da PI: 5.8221 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.3 | 7.5e-20 | 58 | 113 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe++F+++++p+ ++r+eL+++l+L+ qVk+WFqN+R++ k TRIDC7AG043000.4 58 KKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRSLSLEPLQVKFWFQNKRTQIK 113 688999**********************************************9987 PP | |||||||
2 | START | 186.7 | 1.2e-58 | 237 | 459 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE..EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS START 1 elaeeaaqelvkkalaeepgWvkss..esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 ela +a++elv++a+++ep+Wv s e + ++e+ + f+++ ++ea+r++ vv+m+++ lve l+d++ qW+ + +a+t TRIDC7AG043000.4 237 ELAVAAMEELVRMAQLGEPLWVPSLdgEALGEEEYARAFPRGALgpkspeLRSEASRETDVVIMNHVSLVEMLMDVR-QWSALFSsivsRAAT 328 57899********************999999********99877*********************************.99999999999**** PP EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS START 82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167 l+v+s+g galqlm+ae+q++splvp Rd f+Ry++q+++g w++vdvS+d ++ + +++ Sg+li++++ng+skvtwv TRIDC7AG043000.4 329 LDVLSTGvagnhdGALQLMSAEFQMPSPLVPtRDTQFLRYCKQHPGGAWAVVDVSLDGLRSAAR--VGGHFRRRASGCLIQEMPNGYSKVTWV 419 ***********************************************************99876..3444447******************** PP E-EE--S.SXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 168 ehvdlkg.rlphwllrslvksglaegaktwvatlqrqcek 206 ehv+ ++ +++h l+r+lv+sgla+ga++w++tl+rqce+ TRIDC7AG043000.4 420 EHVEAGDdAMVHDLYRPLVNSGLAFGARRWTSTLKRQCER 459 ****9752678***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 714 aa Download sequence |
MGCTTTSSQG NNNSSNNNEE LEMSKSGTGS DNNLDGGEGG GGEDDEQEDP AGQHPRKKKR 60 YHRHTQHQIQ ELEAFFKECP HPDDKQRKEL SRSLSLEPLQ VKFWFQNKRT QIKTQHERQE 120 NTALRTENEK LRAENMRYKE ALANASCPNC GGPAAIGEMS FDEHHLRVEN ARLRDEIDRI 180 SAIAAKYVGG KPGAGVAVAS AAYPPLPPQS SGRSALDHLG MPSMFGGAEF DKPMVIELAV 240 AAMEELVRMA QLGEPLWVPS LDGEALGEEE YARAFPRGAL GPKSPELRSE ASRETDVVIM 300 NHVSLVEMLM DVRQWSALFS SIVSRAATLD VLSTGVAGNH DGALQLMSAE FQMPSPLVPT 360 RDTQFLRYCK QHPGGAWAVV DVSLDGLRSA ARVGGHFRRR ASGCLIQEMP NGYSKVTWVE 420 HVEAGDDAMV HDLYRPLVNS GLAFGARRWT STLKRQCERL ASAMATVPSS GGDVITTAEG 480 RRSMLKLAER MTASFCGGVT ASTTHQWTTL SGSGAEDVRV MTRKSVDDPG RPPGIILNAA 540 TSFWLPVPPS RVFGFLRDDS TRSEWDILSN GGVVQEMAHI ANGSHHGNAV SLLRVNNANS 600 NQSNMLILQE CCTDATGSYV VYAPVDVVAM NVVLNGGDPD YVALLPSGFA ILPDGPAGAP 660 DAGGSLLTVA FQILVDSVPT AKLSLGSVAT VNSLIACTVD RIKAAVVVSP GDNA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21750.2 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG043000.4 |