PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG043000.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 703aa MW: 75669.3 Da PI: 5.7117 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.3 | 7.4e-20 | 48 | 103 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe++F+++++p+ ++r+eL+++l+L+ qVk+WFqN+R++ k TRIDC7AG043000.3 48 KKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRSLSLEPLQVKFWFQNKRTQIK 103 688999**********************************************9987 PP | |||||||
2 | START | 186.7 | 1.2e-58 | 227 | 449 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE..EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS START 1 elaeeaaqelvkkalaeepgWvkss..esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 ela +a++elv++a+++ep+Wv s e + ++e+ + f+++ ++ea+r++ vv+m+++ lve l+d++ qW+ + +a+t TRIDC7AG043000.3 227 ELAVAAMEELVRMAQLGEPLWVPSLdgEALGEEEYARAFPRGALgpkspeLRSEASRETDVVIMNHVSLVEMLMDVR-QWSALFSsivsRAAT 318 57899********************999999********99877*********************************.99999999999**** PP EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS START 82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167 l+v+s+g galqlm+ae+q++splvp Rd f+Ry++q+++g w++vdvS+d ++ + +++ Sg+li++++ng+skvtwv TRIDC7AG043000.3 319 LDVLSTGvagnhdGALQLMSAEFQMPSPLVPtRDTQFLRYCKQHPGGAWAVVDVSLDGLRSAAR--VGGHFRRRASGCLIQEMPNGYSKVTWV 409 ***********************************************************99876..3444447******************** PP E-EE--S.SXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 168 ehvdlkg.rlphwllrslvksglaegaktwvatlqrqcek 206 ehv+ ++ +++h l+r+lv+sgla+ga++w++tl+rqce+ TRIDC7AG043000.3 410 EHVEAGDdAMVHDLYRPLVNSGLAFGARRWTSTLKRQCER 449 ****9752678***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 703 aa Download sequence |
LCNAELDGWD APPPAPSTGS DNNLDGGEGG GGEDDEQEDP AGQHPRKKKR YHRHTQHQIQ 60 ELEAFFKECP HPDDKQRKEL SRSLSLEPLQ VKFWFQNKRT QIKTQHERQE NTALRTENEK 120 LRAENMRYKE ALANASCPNC GGPAAIGEMS FDEHHLRVEN ARLRDEIDRI SAIAAKYVGG 180 KPGAGVAVAS AAYPPLPPQS SGRSALDHLG MPSMFGGAEF DKPMVIELAV AAMEELVRMA 240 QLGEPLWVPS LDGEALGEEE YARAFPRGAL GPKSPELRSE ASRETDVVIM NHVSLVEMLM 300 DVRQWSALFS SIVSRAATLD VLSTGVAGNH DGALQLMSAE FQMPSPLVPT RDTQFLRYCK 360 QHPGGAWAVV DVSLDGLRSA ARVGGHFRRR ASGCLIQEMP NGYSKVTWVE HVEAGDDAMV 420 HDLYRPLVNS GLAFGARRWT STLKRQCERL ASAMATVPSS GGDVITTAEG RRSMLKLAER 480 MTASFCGGVT ASTTHQWTTL SGSGAEDVRV MTRKSVDDPG RPPGIILNAA TSFWLPVPPS 540 RVFGFLRDDS TRSEWDILSN GGVVQEMAHI ANGSHHGNAV SLLRVNNANS NQSNMLILQE 600 CCTDATGSYV VYAPVDVVAM NVVLNGGDPD YVALLPSGFA ILPDGPAGAP DAGGSLLTVA 660 FQILVDSVPT AKLSLGSVAT VNSLIACTVD RIKAAVVVSP GDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21750.2 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG043000.3 |