PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG043000.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 779aa MW: 84235.7 Da PI: 6.3217 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.1 | 8.4e-20 | 120 | 175 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe++F+++++p+ ++r+eL+++l+L+ qVk+WFqN+R++ k TRIDC7AG043000.2 120 KKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRSLSLEPLQVKFWFQNKRTQIK 175 688999**********************************************9987 PP | |||||||
2 | START | 186.4 | 1.5e-58 | 299 | 521 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE..EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS START 1 elaeeaaqelvkkalaeepgWvkss..esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 ela +a++elv++a+++ep+Wv s e + ++e+ + f+++ ++ea+r++ vv+m+++ lve l+d++ qW+ + +a+t TRIDC7AG043000.2 299 ELAVAAMEELVRMAQLGEPLWVPSLdgEALGEEEYARAFPRGALgpkspeLRSEASRETDVVIMNHVSLVEMLMDVR-QWSALFSsivsRAAT 390 57899********************999999********99877*********************************.99999999999**** PP EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS START 82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167 l+v+s+g galqlm+ae+q++splvp Rd f+Ry++q+++g w++vdvS+d ++ + +++ Sg+li++++ng+skvtwv TRIDC7AG043000.2 391 LDVLSTGvagnhdGALQLMSAEFQMPSPLVPtRDTQFLRYCKQHPGGAWAVVDVSLDGLRSAAR--VGGHFRRRASGCLIQEMPNGYSKVTWV 481 ***********************************************************99876..3444447******************** PP E-EE--S.SXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 168 ehvdlkg.rlphwllrslvksglaegaktwvatlqrqcek 206 ehv+ ++ +++h l+r+lv+sgla+ga++w++tl+rqce+ TRIDC7AG043000.2 482 EHVEAGDdAMVHDLYRPLVNSGLAFGARRWTSTLKRQCER 521 ****9752678***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 779 aa Download sequence |
FLNFLISCTL QIRSDSQAFN SNLMDGMHHH QLPAMLQHQM VDHHLLLPQH HHHPHQQAAT 60 SESDARGPHG RGNNNSSNNN EELEMSKSGT GSDNNLDGGE GGGGEDDEQE DPAGQHPRKK 120 KRYHRHTQHQ IQELEAFFKE CPHPDDKQRK ELSRSLSLEP LQVKFWFQNK RTQIKTQHER 180 QENTALRTEN EKLRAENMRY KEALANASCP NCGGPAAIGE MSFDEHHLRV ENARLRDEID 240 RISAIAAKYV GGKPGAGVAV ASAAYPPLPP QSSGRSALDH LGMPSMFGGA EFDKPMVIEL 300 AVAAMEELVR MAQLGEPLWV PSLDGEALGE EEYARAFPRG ALGPKSPELR SEASRETDVV 360 IMNHVSLVEM LMDVRQWSAL FSSIVSRAAT LDVLSTGVAG NHDGALQLMS AEFQMPSPLV 420 PTRDTQFLRY CKQHPGGAWA VVDVSLDGLR SAARVGGHFR RRASGCLIQE MPNGYSKVTW 480 VEHVEAGDDA MVHDLYRPLV NSGLAFGARR WTSTLKRQCE RLASAMATVP SSGGDVITTA 540 EGRRSMLKLA ERMTASFCGG VTASTTHQWT TLSGSGAEDV RVMTRKSVDD PGRPPGIILN 600 AATSFWLPVP PSRVFGFLRD DSTRSEWDIL SNGGVVQEMA HIANGSHHGN AVSLLRVNNA 660 NSNQSNMLIL QECCTDATGS YVVYAPVDVV AMNVVLNGGD PDYVALLPSG FAILPDGPAG 720 APDAGGSLLT VAFQILVDSV PTAKLSLGSV ATVNSLIACT VDRIKAAVVV SPGDNAGAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21750.2 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG043000.2 |