PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG043000.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 796aa    MW: 85616.3 Da    PI: 6.483
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG043000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.18.6e-20134189156
                       TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       +++ +++t++q++eLe++F+++++p+ ++r+eL+++l+L+  qVk+WFqN+R++ k
  TRIDC7AG043000.1 134 KKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRSLSLEPLQVKFWFQNKRTQIK 189
                       688999**********************************************9987 PP
2START186.41.5e-583135351206
                       HHHHHHHHHHHHHHHHC-TT-EEEE..EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
             START   1 elaeeaaqelvkkalaeepgWvkss..esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                       ela +a++elv++a+++ep+Wv s   e + ++e+ + f+++         ++ea+r++ vv+m+++ lve l+d++ qW+  +     +a+t
  TRIDC7AG043000.1 313 ELAVAAMEELVRMAQLGEPLWVPSLdgEALGEEEYARAFPRGALgpkspeLRSEASRETDVVIMNHVSLVEMLMDVR-QWSALFSsivsRAAT 404
                       57899********************999999********99877*********************************.99999999999**** PP

                       EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS
             START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167
                       l+v+s+g      galqlm+ae+q++splvp Rd  f+Ry++q+++g w++vdvS+d  ++      +   +++ Sg+li++++ng+skvtwv
  TRIDC7AG043000.1 405 LDVLSTGvagnhdGALQLMSAEFQMPSPLVPtRDTQFLRYCKQHPGGAWAVVDVSLDGLRSAAR--VGGHFRRRASGCLIQEMPNGYSKVTWV 495
                       ***********************************************************99876..3444447******************** PP

                       E-EE--S.SXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 168 ehvdlkg.rlphwllrslvksglaegaktwvatlqrqcek 206
                       ehv+ ++ +++h l+r+lv+sgla+ga++w++tl+rqce+
  TRIDC7AG043000.1 496 EHVEAGDdAMVHDLYRPLVNSGLAFGARRWTSTLKRQCER 535
                       ****9752678***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 796 aa     Download sequence    
MPGGMMIPGR NMIGRSNGAG VAYASSSSSA LSLGQNLMDG MHHHQLPAML QHQMVDHHLL  60
LPQHHHHPHQ QAATSESDAR GPHGRGNNNS SNNNEELEMS KSGTGSDNNL DGGEGGGGED  120
DEQEDPAGQH PRKKKRYHRH TQHQIQELEA FFKECPHPDD KQRKELSRSL SLEPLQVKFW  180
FQNKRTQIKT QHERQENTAL RTENEKLRAE NMRYKEALAN ASCPNCGGPA AIGEMSFDEH  240
HLRVENARLR DEIDRISAIA AKYVGGKPGA GVAVASAAYP PLPPQSSGRS ALDHLGMPSM  300
FGGAEFDKPM VIELAVAAME ELVRMAQLGE PLWVPSLDGE ALGEEEYARA FPRGALGPKS  360
PELRSEASRE TDVVIMNHVS LVEMLMDVRQ WSALFSSIVS RAATLDVLST GVAGNHDGAL  420
QLMSAEFQMP SPLVPTRDTQ FLRYCKQHPG GAWAVVDVSL DGLRSAARVG GHFRRRASGC  480
LIQEMPNGYS KVTWVEHVEA GDDAMVHDLY RPLVNSGLAF GARRWTSTLK RQCERLASAM  540
ATVPSSGGDV ITTAEGRRSM LKLAERMTAS FCGGVTASTT HQWTTLSGSG AEDVRVMTRK  600
SVDDPGRPPG IILNAATSFW LPVPPSRVFG FLRDDSTRSE WDILSNGGVV QEMAHIANGS  660
HHGNAVSLLR VNNANSNQSN MLILQECCTD ATGSYVVYAP VDVVAMNVVL NGGDPDYVAL  720
LPSGFAILPD GPAGAPDAGG SLLTVAFQIL VDSVPTAKLS LGSVATVNSL IACTVDRIKA  780
AVVVSPGDNA GAATNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.20.0HD-ZIP family protein