PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG042540.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 169aa    MW: 18797.5 Da    PI: 10.9871
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG042540.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.63.9e-152569347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT+eE+  ++ + ++lG+g+W+ Ia+ + ++Rt+ q+ s+ qky
  TRIDC7AG042540.1 25 PWTEEEHRTFLAGLEKLGKGDWRGIAKNFVTTRTPTQVASHAQKY 69
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
YLSDGGLLQS SGKRRRAQER KKAVPWTEEE HRTFLAGLEK LGKGDWRGIA KNFVTTRTPT  60
QVASHAQKYF LRQTNPNKKK RRSSLFDMMA SDLSPAPNCP ILPPTMAKFH DMVTMTNQLQ  120
NSSLEGVSSS NAANLAKQVT RDLPPPVPSF TATNVDGSLS KMNHMSLLR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17882KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.12e-39MYB family protein