PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG041840.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 177aa MW: 18947.4 Da PI: 9.7607 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.8 | 1e-07 | 33 | 74 | 2 | 40 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 g WT +E ell + +++ g +W++Ia+ +g +Rt++++ TRIDC7AG041840.4 33 GEWTDQEMELLRRQMLKHPAGepqRWEKIAAVFGGRRTPESV 74 78********************************99999987 PP | |||||||
2 | Myb_DNA-binding | 22 | 3.8e-07 | 120 | 163 | 2 | 43 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 g W++ Ed l++a k+++++ +W+++a+ ++ g+t c r TRIDC7AG041840.4 120 GGWSAGEDRSLLNALKEFPKDtamRWEKVAAAVP-GKTKAGCMKR 163 56********************************.***9888776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
PVAPPVQPPP LRQEAMGAGT AVLDGGEREE EVGEWTDQEM ELLRRQMLKH PAGEPQRWEK 60 IAAVFGGRRT PESVIRAAKS GGATAAGGSF EQFLRKRKPL DPRAGAADAD TGGNAGGGDG 120 GWSAGEDRSL LNALKEFPKD TAMRWEKVAA AVPGKTKAGC MKRVTELKRD FRSSKEP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 99 | LRKRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45420.1 | 6e-41 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG041840.4 |