PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG041840.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 307aa    MW: 32356.3 Da    PI: 8.2265
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG041840.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.62.5e-07163204240
                       SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 
                       g WT +E ell +   +++ g   +W++Ia+ +g +Rt++++
  TRIDC7AG041840.2 163 GEWTDQEMELLRRQMLKHPAGepqRWEKIAAVFGGRRTPESV 204
                       78********************************99999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
DDDWDSQPRA RVVHSRADAA ANFSSPTANP ASRSLPHVAA CAAAAVLLLA AAYSLDSAYQ  60
VFASILVWIA SSLLLAPFAP SSATGGDISV GRGSLLPDQE PSQEPTPDPI APSRRGRRQN  120
AAPPPPKSSD PVAPPVQPPP LRQEAMGAGT AVLDGGEREE EVGEWTDQEM ELLRRQMLKH  180
PAGEPQRWEK IAAVFGGRRT PESVIRAAKS GGATAAGGSF EQFLRKRKPL DPRAGAADAD  240
TGGNAGGGDG GWSAGEDRSL LNALKEFPKD TAMRWEKVAA AVPGKTKAGC MKRVTELKRD  300
FRSSKEP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1224229LRKRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.14e-40MYB_related family protein