PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG039080.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 314aa    MW: 35046 Da    PI: 5.1828
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG039080.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.51.9e-14867155
               AP2  1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55
                      s+y+GV++ k++g+++A+++d  s+  g  ++ k+++lg++ t+e Aa+a++ a++k++g
  TRIDC7AG039080.4  8 SRYHGVTRLKWSGKYEAHLWDnTSQvEGrkRKgKHVYLGSYVTEENAARAHDLAALKYWG 67
                      79*******************666696675336************************987 PP
2AP246.87.1e-15112165155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++k +g+W A+I    e +    k ++lg+f t+ eAa+a++ a+ +l+g
  TRIDC7AG039080.4 112 SSYRGVTRRK-DGKWQARIGRIGEsR--DtKDIYLGTFETEVEAAEAYDLAAIQLRG 165
                       67*****999.9******99953323..36**********99************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
KCAAPRSSRY HGVTRLKWSG KYEAHLWDNT SQVEGRKRKG KHVYLGSYVT EENAARAHDL  60
AALKYWGITQ PTKLNFNISD YAKEIEIMKS MNQDEFVAYI RRQSSCFSRG TSSYRGVTRR  120
KDGKWQARIG RIGESRDTKD IYLGTFETEV EAAEAYDLAA IQLRGVHAVT NFDISNYSEE  180
GLKKLEGSSE VVNLEDQSEV TKLAVTNLDI SQHCEDGLKK LDGASQIVNL EDQSEVTKLS  240
VTNFDISNCC EDGLKKLDGA SQIVNLEDQS EVTKLSVTNF DISNCCEDGL KKLEGSSEVA  300
NLEDQSEVTK LAGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.19e-73AP2 family protein