PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG035560.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SRS | ||||||||
Protein Properties | Length: 184aa MW: 19243.9 Da PI: 9.2543 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 113.1 | 4.1e-35 | 100 | 171 | 3 | 80 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelks 80 +gt+sCqdCGnqakkdC h+RCRtCCksrgfdCathvkstWvpaa+rrer++q+ + +++ ++ kr+re + TRIDC7AG035560.3 100 AGTISCQDCGNQAKKDCPHMRCRTCCKSRGFDCATHVKSTWVPAARRRERHHQQPQGQTS------AEPFKRPREAGQ 171 6899**********************************************8777665443......445555555422 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
GFPLGGGGHH SRGGRDDDGS HPPGINPSSS SSAAAFLYAT TPSRGGFQLW QGQPQPQHEQ 60 QHHQFYGGAS SSIIRFADDP AASGSSSRGG GRGSGAGAGA GTISCQDCGN QAKKDCPHMR 120 CRTCCKSRGF DCATHVKSTW VPAARRRERH HQQPQGQTSA EPFKRPREAG QPSSTTPTTT 180 SSVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19790.1 | 1e-28 | SRS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG035560.3 |