PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG035560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SRS | ||||||||
Protein Properties | Length: 143aa MW: 14425 Da PI: 6.385 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 86.3 | 7.1e-27 | 16 | 74 | 96 | 154 |
DUF702 96 skkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++++ + ++P+evsseavfrcvr++ vd++e+e+aYqt+vsigGhvfkGiL+d G+++ TRIDC7AG035560.1 16 QQQMMAADRFPREVSSEAVFRCVRLGPVDEAEAEVAYQTTVSIGGHVFKGILHDVGPDT 74 577889999***********************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
AKPASPPPPP LPLLPQQQMM AADRFPREVS SEAVFRCVRL GPVDEAEAEV AYQTTVSIGG 60 HVFKGILHDV GPDTSITGGT RTGHHAVEGS SPSTAAAGGA EGGSGSTGAA AVSSSAVVMD 120 PYPTPGPYGA YGGAPFFHGH HPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18120.1 | 5e-19 | SRS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG035560.1 |