PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG034350.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CO-like

Protein Properties

Length: 496aa MW: 52589.9 Da PI: 7.0449

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG034350.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.2	1.1e-05	15	56	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + + C+ ++e + l+C+ + lC C + H H TRIDC7AG034350.2 15 QHWPCDYCGEAAAALHCRADAARLCVACDRHVHAAnalsrkH 56 5689*****9****************999545555555 PP
2	CCT	63.9	5e-22	443	487	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 R+ a++RYkeKrk+R++eK+irYesRK +A++R+RvKGrFvk++e TRIDC7AG034350.2 443 RDSAMQRYKEKRKNRRYEKHIRYESRKLRADTRKRVKGRFVKSNE 487 899***************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
ACRTLAMKDS VGTRQHWPCD YCGEAAAALH CRADAARLCV ACDRHVHAAN ALSRKHVRAP 60 LCAGCAARPA AARVAAGGGE PAFLCADCDG GCEGAARVPV VGFAGCPAAS ELAASWGVDL 120 LPGAGAAAAF GCGLGGGGGD QEDEDAFFFS SLDYSMLVDP EMRDLYVPCN PPEVAVSAGG 180 GRPLKGEALC HQLAEMARRE TETSQPQGYS DLSPRTPRRS SAGASGRLPD KQAPPPLPPA 240 PEVPCPYTSL LMMPSAHCAE LIGNDRLRDD DEEQLRWEFA PPSSVPPTQI WDFNLGRSRN 300 HNEKTAHEIG FGSNNGGFMI KSYSDMLKEI SCGTTKDLED IYDSGYGAAA EDIMSTNICQ 360 VPSKNVSTAS NKRMKVSSCT STMDGPTTSG SHVPASGGAL GSSSHDRGAA PAREISFGDQ 420 TIVPTGPERP AARIDSETLA LNRDSAMQRY KEKRKNRRYE KHIRYESRKL RADTRKRVKG 480 RFVKSNEALN AGSNGG

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

ACRTLAMKDS VGTRQHWPCD YCGEAAAALH CRADAARLCV ACDRHVHAAN ALSRKHVRAP  60
LCAGCAARPA AARVAAGGGE PAFLCADCDG GCEGAARVPV VGFAGCPAAS ELAASWGVDL  120
LPGAGAAAAF GCGLGGGGGD QEDEDAFFFS SLDYSMLVDP EMRDLYVPCN PPEVAVSAGG  180
GRPLKGEALC HQLAEMARRE TETSQPQGYS DLSPRTPRRS SAGASGRLPD KQAPPPLPPA  240
PEVPCPYTSL LMMPSAHCAE LIGNDRLRDD DEEQLRWEFA PPSSVPPTQI WDFNLGRSRN  300
HNEKTAHEIG FGSNNGGFMI KSYSDMLKEI SCGTTKDLED IYDSGYGAAA EDIMSTNICQ  360
VPSKNVSTAS NKRMKVSSCT STMDGPTTSG SHVPASGGAL GSSSHDRGAA PAREISFGDQ  420
TIVPTGPERP AARIDSETLA LNRDSAMQRY KEKRKNRRYE KHIRYESRKL RADTRKRVKG  480
RFVKSNEALN AGSNGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.1	1e-27	CO-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG034350.2