PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG033800.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 248aa MW: 28732.7 Da PI: 8.7039 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.5 | 1.3e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s TRIDC7AG033800.5 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 97.3 | 2.3e-32 | 83 | 175 | 7 | 99 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ e+++ +++++e+ kLk++++nLqr+qR+llGedL+sL +keL++Le+qL++slk+iR+++++++++q+ elq++e++ +e+nk+Lr k++ TRIDC7AG033800.5 83 QNRENEQLKNSRNEYLKLKARVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTELQRREQMFSEANKCLRIKIQ 175 44788999*********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIVFSN RGKLYEFCST 60 QSMTKTLDKY QKCSYAGPET TVQNRENEQL KNSRNEYLKL KARVDNLQRT QRNLLGEDLD 120 SLGIKELESL EKQLDSSLKH IRTTRTQHMV DQLTELQRRE QMFSEANKCL RIKIQLEESN 180 QVHGQQLWEH NNNVLSYERQ PEVQPPMHGG NGFFHPLDAA GEPTLHIGYP PESLNSSCMT 240 TFMPPWLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.1 | 2e-90 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG033800.5 |