PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG032020.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 678aa MW: 73570.1 Da PI: 8.134

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG032020.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.9	4.6e-41	72	149	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+adl++ak+yhrrhkvCe+hsk+++++v +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ TRIDC7AG032020.5 72 MCQVDDCRADLTSAKDYHRRHKVCEIHSKTTKAVVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 149 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
LQLTLREEAS MAMDVSPTTT LSSSPSPPAR ASQEQAARPS KRVRSGSPGT ASGGGGGGGG 60 GGSASGGGSY PMCQVDDCRA DLTSAKDYHR RHKVCEIHSK TTKAVVGNQM QRFCQQCSRF 120 HPLSEFDEGK RSCRRRLAGH NRRRRKTQPT DVASQLLLPE NQENAANRTQ DIVNLITVIA 180 RLQGGNVGKL PSIPPIPDKD NLVQIISKIN SINNANSLAK SPPSEAIDLN ASQGQQQDSS 240 VQNATKVVDK QTVPSTMDLL TVLSGALGTS TPETNTSQSQ GSSDSSGNNK SKSHSTEPAC 300 VVNSHEKSIR PFPAAGMLRS SSTHGSPPEV YKQPDRDTHP YLSLQLFGNN EDIPVKMDTA 360 NKYLSSESSN PMDERSPSSS PPVTHTFFPT RSVNEGIRHP RIADYGEDGA TVENSTTRAW 420 CAPPLELFKD SERPTENGSP PNPTYQSCYA STSGSDHSPS TSNSDGQDRT GKIIFKLFGK 480 EPGSIPGNLR DEVVNWLKHS PTEMEGYIRP GCLVLSMYLS MPTIAWDELQ ENFLQRVNSL 540 VQASDLDFWR KGRFLVRSDN QLVSYKDGMT CLSKSWRTWN TPELTLVTPI AVVGGRKTSL 600 VLKGRNLTIP GTQIHCTSAG KYISKEVLCS AYPGTIYDDS GVETFDLPGE PSLTLGRCFI 660 EVCTLYLGCS RYVKIYSS

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

LQLTLREEAS MAMDVSPTTT LSSSPSPPAR ASQEQAARPS KRVRSGSPGT ASGGGGGGGG  60
GGSASGGGSY PMCQVDDCRA DLTSAKDYHR RHKVCEIHSK TTKAVVGNQM QRFCQQCSRF  120
HPLSEFDEGK RSCRRRLAGH NRRRRKTQPT DVASQLLLPE NQENAANRTQ DIVNLITVIA  180
RLQGGNVGKL PSIPPIPDKD NLVQIISKIN SINNANSLAK SPPSEAIDLN ASQGQQQDSS  240
VQNATKVVDK QTVPSTMDLL TVLSGALGTS TPETNTSQSQ GSSDSSGNNK SKSHSTEPAC  300
VVNSHEKSIR PFPAAGMLRS SSTHGSPPEV YKQPDRDTHP YLSLQLFGNN EDIPVKMDTA  360
NKYLSSESSN PMDERSPSSS PPVTHTFFPT RSVNEGIRHP RIADYGEDGA TVENSTTRAW  420
CAPPLELFKD SERPTENGSP PNPTYQSCYA STSGSDHSPS TSNSDGQDRT GKIIFKLFGK  480
EPGSIPGNLR DEVVNWLKHS PTEMEGYIRP GCLVLSMYLS MPTIAWDELQ ENFLQRVNSL  540
VQASDLDFWR KGRFLVRSDN QLVSYKDGMT CLSKSWRTWN TPELTLVTPI AVVGGRKTSL  600
VLKGRNLTIP GTQIHCTSAG KYISKEVLCS AYPGTIYDDS GVETFDLPGE PSLTLGRCFI  660
EVCTLYLGCS RYVKIYSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76580.1	1e-136	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG032020.5