PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG032020.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 1104aa MW: 120609 Da PI: 7.384

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG032020.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130	8.8e-41	189	266	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+adl++ak+yhrrhkvCe+hsk+++++v +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ TRIDC7AG032020.2 189 MCQVDDCRADLTSAKDYHRRHKVCEIHSKTTKAVVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 266 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1104 aa Download sequence
MQREVGPQVA SPLYLHQIQP LPPHAAAAAR KRGSPWPAVE PPENAAMGAA AAAGGNWNPS 60 MWDWDSRAFT ARPSSDALRL GGGLNHHHHQ QQQQAPPPPA TAAEVRRQGG GGAGDLSLQL 120 TLREEASMAM DVSPTTTLSS SPSPPARASQ EQAARPSKRV RSGSPGTASG GGGGGGGGGS 180 ASGGGSYPMC QVDDCRADLT SAKDYHRRHK VCEIHSKTTK AVVGNQMQRF CQQCSRFHPL 240 SEFDEGKRSC RRRLAGHNRR RRKTQPTDVA SQLLLPENQE NAANRTQDIV NLITVIARLQ 300 GGNVGKLPSI PPIPDKDNLV QIISKINSIN NANSLAKSPP SEAIDLNASQ GQQQDSSVQN 360 ATKVVDKQTV PSTMDLLTVL SGALGTSTPE TNTSQSQGSS DSSGNNKSKS HSTEPACVVN 420 SHEKSIRPFP AAGMLRSSST HGSPPEVYKQ PDRDTHPYLS LQLFGNNEDI PVKMDTANKY 480 LSSESSNPMD ERSPSSSPPV THTFFPTRSV NEGIRHPRIA DYGEDGATVE NSTTRAWCAP 540 PLELFKDSER PTENGSPPNP TYQSCYASTS GSDHSPSTSN SDGQDRTGKI IFKLFGKEPG 600 SIPGNLRDEV VNWLKHSPTE MEGYIRPGCL VLSMYLSMPT IAWDELQENF LQRVNSLVQA 660 SDLDFWRKGR TWNTPELTLV TPIAVVGGRK TSLVLKGRNL TIPGTQIHCT SAGKYISKEV 720 LCSAYPGTIY DDSGVETFDL PGEPSLTLGR CFIEVENRFR GNSFPVIFAN KSICQELRNL 780 EDELEDSRFP DVSPDDQVHD ARRLKPRDQV LHFLNELGWL FQKAAACTPS TKSDVSHSEL 840 IQFSTARFRH LLLFSNERDW CSLTKTLLEI LTKRSMVSDE LSHETLEMLS EIHLLNRAVK 900 RKSSHMVHLL VQFVVICPDN SKLYPFLPNY PGPGGLTPLH LAASIDDAED IVDALTDDPQ 960 QIGLSCWHSV LDDEGLSPEV YATFRNNGSY NELVTRKLMD RKNSQVTIVL NKGEIHIDQP 1020 GNVGANNASG IQALEIRSCN QCAILESGLL RRPMRSRGLL ARPYIHSMLA IAAVCVCVCV 1080 FMRALLRFNS GRSFKWERLD FGPT

Sequence ? help Back to Top

Protein Sequence Length: 1104 aa Download sequence

MQREVGPQVA SPLYLHQIQP LPPHAAAAAR KRGSPWPAVE PPENAAMGAA AAAGGNWNPS  60
MWDWDSRAFT ARPSSDALRL GGGLNHHHHQ QQQQAPPPPA TAAEVRRQGG GGAGDLSLQL  120
TLREEASMAM DVSPTTTLSS SPSPPARASQ EQAARPSKRV RSGSPGTASG GGGGGGGGGS  180
ASGGGSYPMC QVDDCRADLT SAKDYHRRHK VCEIHSKTTK AVVGNQMQRF CQQCSRFHPL  240
SEFDEGKRSC RRRLAGHNRR RRKTQPTDVA SQLLLPENQE NAANRTQDIV NLITVIARLQ  300
GGNVGKLPSI PPIPDKDNLV QIISKINSIN NANSLAKSPP SEAIDLNASQ GQQQDSSVQN  360
ATKVVDKQTV PSTMDLLTVL SGALGTSTPE TNTSQSQGSS DSSGNNKSKS HSTEPACVVN  420
SHEKSIRPFP AAGMLRSSST HGSPPEVYKQ PDRDTHPYLS LQLFGNNEDI PVKMDTANKY  480
LSSESSNPMD ERSPSSSPPV THTFFPTRSV NEGIRHPRIA DYGEDGATVE NSTTRAWCAP  540
PLELFKDSER PTENGSPPNP TYQSCYASTS GSDHSPSTSN SDGQDRTGKI IFKLFGKEPG  600
SIPGNLRDEV VNWLKHSPTE MEGYIRPGCL VLSMYLSMPT IAWDELQENF LQRVNSLVQA  660
SDLDFWRKGR TWNTPELTLV TPIAVVGGRK TSLVLKGRNL TIPGTQIHCT SAGKYISKEV  720
LCSAYPGTIY DDSGVETFDL PGEPSLTLGR CFIEVENRFR GNSFPVIFAN KSICQELRNL  780
EDELEDSRFP DVSPDDQVHD ARRLKPRDQV LHFLNELGWL FQKAAACTPS TKSDVSHSEL  840
IQFSTARFRH LLLFSNERDW CSLTKTLLEI LTKRSMVSDE LSHETLEMLS EIHLLNRAVK  900
RKSSHMVHLL VQFVVICPDN SKLYPFLPNY PGPGGLTPLH LAASIDDAED IVDALTDDPQ  960
QIGLSCWHSV LDDEGLSPEV YATFRNNGSY NELVTRKLMD RKNSQVTIVL NKGEIHIDQP  1020
GNVGANNASG IQALEIRSCN QCAILESGLL RRPMRSRGLL ARPYIHSMLA IAAVCVCVCV  1080
FMRALLRFNS GRSFKWERLD FGPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76580.1	0.0	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG032020.2