PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG031600.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 376aa    MW: 39256.4 Da    PI: 9.1409
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG031600.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP125.22.6e-3976158176
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS.......EEETTT--SS--S-STTTT-------S- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr.......fhelsefDeekrsCrrrLakhnerrrkk 76 
                       +CqvegC +dls ak+yh rhkvC++h+k p v+v+gleqrfCqqCsr       fh+l efD++krsCrrrLa+hnerrrk+
  TRIDC7AG031600.3  76 RCQVEGCGVDLSGAKQYHCRHKVCSMHTKEPRVVVAGLEQRFCQQCSRspfllppFHQLPEFDQGKRSCRRRLAGHNERRRKA 158
                       6**********************************************999999999*************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
IGSGGCGGGD GSGGGGGDDQ QRHGLKFGKK IYFEDSTGPG GGSGGVNASS SKPPAGGGRK  60
GKAVAAGGAS GSAPPRCQVE GCGVDLSGAK QYHCRHKVCS MHTKEPRVVV AGLEQRFCQQ  120
CSRSPFLLPP FHQLPEFDQG KRSCRRRLAG HNERRRKAPP GPLATRYGRL AASFEEPGRF  180
RSYLLDFSYP RVPSSVRDAW PGARPGYRMP GEIQWQGNLD LRPHTGAGTG YGHHHAYSSH  240
GGFPGPELPP GGCLAGVAAD SSCALSLLST QPWDNTPHGA SHDHRSAGFD GHPVGVSPSI  300
MASNYMPPPA SPWGGSRGHE GGRNAPHQQL PHDVQLHEVH HPAGSSQHGH FSGELELALQ  360
GNRPAPGPRG GDHGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42200.12e-39SBP family protein