PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG031600.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 376aa MW: 39256.4 Da PI: 9.1409 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 125.2 | 2.6e-39 | 76 | 158 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS.......EEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr.......fhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC +dls ak+yh rhkvC++h+k p v+v+gleqrfCqqCsr fh+l efD++krsCrrrLa+hnerrrk+ TRIDC7AG031600.3 76 RCQVEGCGVDLSGAKQYHCRHKVCSMHTKEPRVVVAGLEQRFCQQCSRspfllppFHQLPEFDQGKRSCRRRLAGHNERRRKA 158 6**********************************************999999999*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
IGSGGCGGGD GSGGGGGDDQ QRHGLKFGKK IYFEDSTGPG GGSGGVNASS SKPPAGGGRK 60 GKAVAAGGAS GSAPPRCQVE GCGVDLSGAK QYHCRHKVCS MHTKEPRVVV AGLEQRFCQQ 120 CSRSPFLLPP FHQLPEFDQG KRSCRRRLAG HNERRRKAPP GPLATRYGRL AASFEEPGRF 180 RSYLLDFSYP RVPSSVRDAW PGARPGYRMP GEIQWQGNLD LRPHTGAGTG YGHHHAYSSH 240 GGFPGPELPP GGCLAGVAAD SSCALSLLST QPWDNTPHGA SHDHRSAGFD GHPVGVSPSI 300 MASNYMPPPA SPWGGSRGHE GGRNAPHQQL PHDVQLHEVH HPAGSSQHGH FSGELELALQ 360 GNRPAPGPRG GDHGSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 2e-39 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG031600.3 |