PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG031600.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 386aa MW: 40265.3 Da PI: 8.8431

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG031600.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134	4.8e-42	78	153	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC +dls ak+yh rhkvC++h+k p v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ TRIDC7AG031600.2 78 RCQVEGCGVDLSGAKQYHCRHKVCSMHTKEPRVVVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKA 153 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEIGSGGCGG GDGSGGGGGD DQQRHGLKFG KKIYFEDSTG PGGGSGGVNA SSSKPPAGGG 60 RKGKAVAAGG ASGSAPPRCQ VEGCGVDLSG AKQYHCRHKV CSMHTKEPRV VVAGLEQRFC 120 QQCSRFHQLP EFDQGKRSCR RRLAGHNERR RKAPPGPLAT RYGRLAASFE EPGRFRSYLL 180 DFSYPRVPSS VRDAWPGARP GYRMPGEIQW QGNLDLRPHT GAGTGYGHHH AYSSHGGFPG 240 PELPPGGCLA GVAADSSCAL SLLSTQPWDN TPHGASHDHR SAGFDGHPVG VSPSIMASNY 300 MPPPASPWGG SRGHEGGRNA PHQQLPHDVQ LHEVHHPAGS SQHGHFSGEL ELALQGNRPA 360 PGPRGGDHGS SGGAFDHPGS SSNWSL

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEIGSGGCGG GDGSGGGGGD DQQRHGLKFG KKIYFEDSTG PGGGSGGVNA SSSKPPAGGG  60
RKGKAVAAGG ASGSAPPRCQ VEGCGVDLSG AKQYHCRHKV CSMHTKEPRV VVAGLEQRFC  120
QQCSRFHQLP EFDQGKRSCR RRLAGHNERR RKAPPGPLAT RYGRLAASFE EPGRFRSYLL  180
DFSYPRVPSS VRDAWPGARP GYRMPGEIQW QGNLDLRPHT GAGTGYGHHH AYSSHGGFPG  240
PELPPGGCLA GVAADSSCAL SLLSTQPWDN TPHGASHDHR SAGFDGHPVG VSPSIMASNY  300
MPPPASPWGG SRGHEGGRNA PHQQLPHDVQ LHEVHHPAGS SQHGHFSGEL ELALQGNRPA  360
PGPRGGDHGS SGGAFDHPGS SSNWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	5e-42	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG031600.2