PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG031460.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 381aa MW: 41989.6 Da PI: 10.8945

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG031460.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.9	3.6e-13	321	366	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +Av+YIk+Lq TRIDC7AG031460.3 321 SIAERVRRTRISERIRKLQELVPNM----DKQTNTADMLDLAVDYIKELQ 366 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MYGSPASKDL NQPPPPTMNS SGLLRYRSAP STLLGEVCEE FLQPGPRAAS PDAAAAADNV 60 FSRFLADHQI RDTKPPPPPP VAPGAHFPDD SAAMASQQHQ QQMMFHSQHQ QQQQQMPPVG 120 VEGLYRTVSS AGMDSATAGG ASSLLRQSSS PAGFLNHLNM DNGREFRVRE HAAARHGRRL 180 PERRRQRRGR GLLRQQAQGA AQLLLAAGVA HVPDLGDGQR GSRRQQPRGR RRQPRLHPRL 240 PDELRVGGVV AHVGEHVRDE APPGLLRACR SVSPVQNGLA HQFSLPKTSS EMAAIEKFLQ 300 FQDAVPCKIR AKRGCATHPR SIAERVRRTR ISERIRKLQE LVPNMDKQTN TADMLDLAVD 360 YIKELQEQVK VINESRANCT C

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MYGSPASKDL NQPPPPTMNS SGLLRYRSAP STLLGEVCEE FLQPGPRAAS PDAAAAADNV  60
FSRFLADHQI RDTKPPPPPP VAPGAHFPDD SAAMASQQHQ QQMMFHSQHQ QQQQQMPPVG  120
VEGLYRTVSS AGMDSATAGG ASSLLRQSSS PAGFLNHLNM DNGREFRVRE HAAARHGRRL  180
PERRRQRRGR GLLRQQAQGA AQLLLAAGVA HVPDLGDGQR GSRRQQPRGR RRQPRLHPRL  240
PDELRVGGVV AHVGEHVRDE APPGLLRACR SVSPVQNGLA HQFSLPKTSS EMAAIEKFLQ  300
FQDAVPCKIR AKRGCATHPR SIAERVRRTR ISERIRKLQE LVPNMDKQTN TADMLDLAVD  360
YIKELQEQVK VINESRANCT C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	229	236	GRRRQPRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	4e-43	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG031460.3